RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 FGD1P98174 961 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 TBC1D8BQ0IIM8 1120 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 TMEM173Q86WV6 379 aaPredicted RBP16.23■□□□□ 0.19
CTSB-221ENST00000531502 NECTIN4Q96NY8 510 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 RNF26Q9BY78 433 aaPredicted RBP16.23■□□□□ 0.19
CTSB-221ENST00000531502 MRPL9Q9BYD2 267 aaKnown RBP16.23■□□□□ 0.19
CTSB-221ENST00000531502 NIFKQ9BYG3 293 aaKnown RBP16.23■□□□□ 0.19
CTSB-221ENST00000531502 ZBP1Q9H171 429 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 CHST12Q9NRB3 414 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 DACT1Q9NYF0 836 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 VPS54Q9P1Q0 977 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 SORCS3Q9UPU3 1222 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 PLXNA3P51805 1871 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 CHMP2AO43633 222 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 ST18O60284 1047 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 CDC45O75419 566 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 BRD1O95696 1058 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 CXCL14O95715 111 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 IFNAR1P17181 557 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 PHKA2P46019 1235 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 ALDH7A1P49419 539 aaKnown RBP16.22■□□□□ 0.19
CTSB-221ENST00000531502 LRCH2Q5VUJ6 765 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 UBALD2Q8IYN6 164 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 CCDC148Q8NFR7 591 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 NLRP7Q8WX94 980 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 JAKMIP1Q96N16 626 aaKnown RBP16.22■□□□□ 0.19
CTSB-221ENST00000531502 SNX14Q9Y5W7 946 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 IRAK3Q9Y616 596 aa16.22■□□□□ 0.19
CTSB-221ENST00000531502 ZFHX2Q9C0A1 2572 aaPredicted RBP16.22■□□□□ 0.19
CTSB-221ENST00000531502 TMEM150BA6NC51 233 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 MEIS3P2A8K0S8 358 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 WEE2P0C1S8 567 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 HSPA4P34932 840 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 MTHFRP42898 656 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 NUBP1P53384 320 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 EVCP57679 992 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 Q4G0T1 1027 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 CES5AQ6NT32 575 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 KANK3Q6NY19 840 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 ZBTB33Q86T24 672 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 VPS52Q8N1B4 723 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 C12orf76Q8N812 135 aaPredicted RBP16.21■□□□□ 0.19
CTSB-221ENST00000531502 RDM1Q8NG50 284 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 FEZF2Q8TBJ5 459 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 SLC22A17Q8WUG5 538 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 BCL7CQ8WUZ0 217 aaPredicted RBP16.21■□□□□ 0.19
CTSB-221ENST00000531502 AUTS2Q8WXX7 1259 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 LPPQ93052 612 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 TMEM169Q96HH4 297 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 SCLT1Q96NL6 688 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 TEKT3Q9BXF9 490 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 SLC26A6Q9BXS9 759 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 GCOM2Q9BZD3 368 aaPredicted RBP16.21■□□□□ 0.19
CTSB-221ENST00000531502 SMOC2Q9H3U7 446 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 NRDE2Q9H7Z3 1164 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 TSHZ2Q9NRE2 1034 aa16.21■□□□□ 0.19
CTSB-221ENST00000531502 CYP3A7-CYP3A51PA0A087WV96 503 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 A0A087WZ62 844 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 M0R2N6 131 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 CTSAP10619 480 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 EPCAMP16422 314 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 RPS6KB1P23443 525 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 CYP3A7P24462 503 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 CDC42EP1Q00587 391 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 AKAP17AQ02040 695 aaKnown RBP16.2■□□□□ 0.18
CTSB-221ENST00000531502 MTMR3Q13615 1198 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 MTERF2Q49AM1 385 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 XKR3Q5GH77 459 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 RARS2Q5T160 578 aaKnown RBP16.2■□□□□ 0.18
CTSB-221ENST00000531502 KIAA1841Q6NSI8 718 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 BLOC1S2Q6QNY1 142 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 MIER3Q7Z3K6 550 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 DDX53Q86TM3 631 aaKnown RBP16.2■□□□□ 0.18
CTSB-221ENST00000531502 TBCKQ8TEA7 893 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 RSPH1Q8WYR4 309 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 IGSF21Q96ID5 467 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 MBOAT7Q96N66 472 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 SH2D3AQ9BRG2 576 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 FDXACB1Q9BRP7 624 aaPredicted RBP16.2■□□□□ 0.18
CTSB-221ENST00000531502 VN1R3Q9BXE9 311 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 IRF2BPLQ9H1B7 796 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 SH3GLB2Q9NR46 395 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 TBC1D13Q9NVG8 400 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 SEPT9Q9UHD8 586 aaPredicted RBP16.2■□□□□ 0.18
CTSB-221ENST00000531502 DENND4AQ7Z401 1863 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 CFAP54Q96N23 3096 aa16.2■□□□□ 0.18
CTSB-221ENST00000531502 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.19■□□□□ 0.18
CTSB-221ENST00000531502 H0Y858 1186 aa16.19■□□□□ 0.18
CTSB-221ENST00000531502 GALR2O43603 387 aaPredicted RBP16.19■□□□□ 0.18
CTSB-221ENST00000531502 B4GALT3O60512 393 aa16.19■□□□□ 0.18
CTSB-221ENST00000531502 GFRA3O60609 400 aa16.19■□□□□ 0.18
CTSB-221ENST00000531502 ZNF623O75123 536 aa16.19■□□□□ 0.18
CTSB-221ENST00000531502 ZC3H11AO75152 810 aaKnown RBP eCLIP16.19■□□□□ 0.18
CTSB-221ENST00000531502 MAFO75444 373 aaPredicted RBP16.19■□□□□ 0.18
CTSB-221ENST00000531502 OFD1O75665 1012 aa16.19■□□□□ 0.18
CTSB-221ENST00000531502 TDP2O95551 362 aa16.19■□□□□ 0.18
CTSB-221ENST00000531502 GALTP07902 379 aa16.19■□□□□ 0.18
CTSB-221ENST00000531502 PDIA3P30101 505 aaKnown RBP16.19■□□□□ 0.18
CTSB-221ENST00000531502 POLGP54098 1239 aaPredicted RBP16.19■□□□□ 0.18
CTSB-221ENST00000531502 ZNF410Q86VK4 478 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms