RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 NLRP4Q96MN2 994 aa21.02■□□□□ 0.96
SMPD1-205ENST00000531303 MAP7D2Q96T17 732 aa21.02■□□□□ 0.96
SMPD1-205ENST00000531303 TSPY26PQ9H489 355 aa21.02■□□□□ 0.96
SMPD1-205ENST00000531303 TRMT13Q9NUP7 481 aaKnown RBP21.02■□□□□ 0.96
SMPD1-205ENST00000531303 SEL1LQ9UBV2 794 aa21.02■□□□□ 0.96
SMPD1-205ENST00000531303 BRCA2P51587 3418 aa21.02■□□□□ 0.96
SMPD1-205ENST00000531303 CD44P16070 742 aaKnown RBP21.01■□□□□ 0.95
SMPD1-205ENST00000531303 PRCPP42785 496 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 MNX1P50219 401 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-205ENST00000531303 SMTNP53814 917 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 ATN1P54259 1190 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-205ENST00000531303 RTP1P59025 263 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 SESTD1Q86VW0 696 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 C17orf75Q9HAS0 396 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 OLFML3Q9NRN5 406 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 NOD1Q9Y239 953 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 SMIM35A0A1B0GVV1 85 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 ARVCFO00192 962 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 PRPF6O94906 941 aaKnown RBP21.01■□□□□ 0.95
SMPD1-205ENST00000531303 CAPSQ13938 189 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 MXD4Q14582 209 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-205ENST00000531303 PPP2R5AQ15172 486 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 ZNF720Q7Z2F6 126 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 NELFCDQ8IXH7 590 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 MLKLQ8NB16 471 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 RNF149Q8NC42 400 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 DEPTORQ8TB45 409 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 SCLT1Q96NL6 688 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 FIZ1Q96SL8 496 aa21.01■□□□□ 0.95
SMPD1-205ENST00000531303 PPP1R3GB7ZBB8 358 aa21■□□□□ 0.95
SMPD1-205ENST00000531303 NAMPTP43490 491 aa21■□□□□ 0.95
SMPD1-205ENST00000531303 PTPN11Q06124 597 aaPredicted RBP21■□□□□ 0.95
SMPD1-205ENST00000531303 HAUS6Q7Z4H7 955 aa21■□□□□ 0.95
SMPD1-205ENST00000531303 MYOCDQ8IZQ8 938 aa21■□□□□ 0.95
SMPD1-205ENST00000531303 SPIRE2Q8WWL2 714 aa21■□□□□ 0.95
SMPD1-205ENST00000531303 TRPV6Q9H1D0 765 aa21■□□□□ 0.95
SMPD1-205ENST00000531303 GINS2Q9Y248 185 aa21■□□□□ 0.95
SMPD1-205ENST00000531303 ADGRA3Q8IWK6 1321 aa20.99■□□□□ 0.95
SMPD1-205ENST00000531303 STIM1Q13586 685 aa20.99■□□□□ 0.95
SMPD1-205ENST00000531303 TFDP1Q14186 410 aa20.99■□□□□ 0.95
SMPD1-205ENST00000531303 ADSSL1Q8N142 457 aa20.99■□□□□ 0.95
SMPD1-205ENST00000531303 SCFD1Q8WVM8 642 aa20.99■□□□□ 0.95
SMPD1-205ENST00000531303 NLRP7Q8WX94 980 aa20.99■□□□□ 0.95
SMPD1-205ENST00000531303 GTPBP4Q9BZE4 634 aaKnown RBP20.99■□□□□ 0.95
SMPD1-205ENST00000531303 CTNND2Q9UQB3 1225 aa20.99■□□□□ 0.95
SMPD1-205ENST00000531303 DENND3A2RUS2 1198 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 ASAP2O43150 1006 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 NCKAP1LP55160 1127 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 STX17P56962 302 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 NLRP11P59045 1033 aaKnown RBP20.98■□□□□ 0.95
SMPD1-205ENST00000531303 KCNA1Q09470 495 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 KIZQ2M2Z5 673 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 SERINC5Q86VE9 423 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 SLC43A3Q8NBI5 491 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 TMEM161BQ8NDZ6 487 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 WNT8BQ93098 351 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 PAWRQ96IZ0 340 aaKnown RBP20.98■□□□□ 0.95
SMPD1-205ENST00000531303 CTAGE1Q96RT6 745 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 DACH1Q9UI36 760 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 PCDHB13Q9Y5F0 798 aa20.98■□□□□ 0.95
SMPD1-205ENST00000531303 A0A087WZ62 844 aa20.97■□□□□ 0.95
SMPD1-205ENST00000531303 B4GALT4O60513 344 aa20.97■□□□□ 0.95
SMPD1-205ENST00000531303 MAPTP10636 758 aaKnown RBP20.97■□□□□ 0.95
SMPD1-205ENST00000531303 TAF2Q6P1X5 1199 aa20.97■□□□□ 0.95
SMPD1-205ENST00000531303 STXBP4Q6ZWJ1 553 aa20.97■□□□□ 0.95
SMPD1-205ENST00000531303 EPM2AIP1Q7L775 607 aaPredicted RBP20.97■□□□□ 0.95
SMPD1-205ENST00000531303 GAS2L3Q86XJ1 694 aa20.97■□□□□ 0.95
SMPD1-205ENST00000531303 ANKLE1Q8NAG6 615 aa20.97■□□□□ 0.95
SMPD1-205ENST00000531303 NELFBQ8WX92 580 aa20.97■□□□□ 0.95
SMPD1-205ENST00000531303 FDXACB1Q9BRP7 624 aaPredicted RBP20.97■□□□□ 0.95
SMPD1-205ENST00000531303 NTPCRQ9BSD7 190 aaKnown RBP20.97■□□□□ 0.95
SMPD1-205ENST00000531303 KCNG1Q9UIX4 513 aa20.97■□□□□ 0.95
SMPD1-205ENST00000531303 PQBP1O60828 265 aaKnown RBP20.96■□□□□ 0.95
SMPD1-205ENST00000531303 EN2P19622 333 aaPredicted RBP20.96■□□□□ 0.95
SMPD1-205ENST00000531303 CDK7P50613 346 aa20.96■□□□□ 0.95
SMPD1-205ENST00000531303 GPC3P51654 580 aa20.96■□□□□ 0.95
SMPD1-205ENST00000531303 SLC39A5Q6ZMH5 540 aa20.96■□□□□ 0.95
SMPD1-205ENST00000531303 GUF1Q8N442 669 aaKnown RBP20.96■□□□□ 0.95
SMPD1-205ENST00000531303 NAT10Q9H0A0 1025 aaKnown RBP20.96■□□□□ 0.95
SMPD1-205ENST00000531303 IKZF4Q9H2S9 585 aa20.96■□□□□ 0.95
SMPD1-205ENST00000531303 RBAK-RBAKDNI3L0D1 243 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 PSMA7O14818 248 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 CSDE1O75534 798 aaKnown RBP20.95■□□□□ 0.94
SMPD1-205ENST00000531303 CTSHP09668 335 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 HOXD13P35453 343 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 THPOP40225 353 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 PHKA2P46019 1235 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 ZNF165P49910 485 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 RSPH3Q86UC2 560 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 ZBTB8OSQ8IWT0 167 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 SYCP3Q8IZU3 236 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 RNF214Q8ND24 703 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 SLC17A8Q8NDX2 589 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 ZNF507Q8TCN5 953 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 C11orf49Q9H6J7 331 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 CDHR5Q9HBB8 845 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 ARHGAP28Q9P2N2 729 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 TBX20Q9UMR3 447 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 USP20Q9Y2K6 914 aa20.95■□□□□ 0.94
SMPD1-205ENST00000531303 DNAH12Q6ZR08 3092 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms