RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 ZSCAN22P10073 491 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-221ENST00000531068 CSPP1Q1MSJ5 1256 aa12.25□□□□□ -0.45
CAPN1-221ENST00000531068 PAN2Q504Q3 1202 aaKnown RBP12.25□□□□□ -0.45
CAPN1-221ENST00000531068 SPOUT1Q5T280 376 aaKnown RBP12.25□□□□□ -0.45
CAPN1-221ENST00000531068 SRGAP1Q7Z6B7 1085 aa12.25□□□□□ -0.45
CAPN1-221ENST00000531068 ABI1Q8IZP0 508 aa12.25□□□□□ -0.45
CAPN1-221ENST00000531068 PRPF31Q8WWY3 499 aaKnown RBP12.25□□□□□ -0.45
CAPN1-221ENST00000531068 RSPH1Q8WYR4 309 aa12.25□□□□□ -0.45
CAPN1-221ENST00000531068 FDXACB1Q9BRP7 624 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-221ENST00000531068 TMEM117Q9H0C3 514 aa12.25□□□□□ -0.45
CAPN1-221ENST00000531068 NSUN3Q9H649 340 aaKnown RBP12.25□□□□□ -0.45
CAPN1-221ENST00000531068 WRAP73Q9P2S5 460 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-221ENST00000531068 PLAGL2Q9UPG8 496 aa12.25□□□□□ -0.45
CAPN1-221ENST00000531068 COL4A3BPQ9Y5P4 624 aa12.25□□□□□ -0.45
CAPN1-221ENST00000531068 DGAT1O75907 488 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 OR52Z1P0C646 297 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 LINC00271P0C7V0 271 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 BMP1P13497 986 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 PDCP20941 246 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 U2AF2P26368 475 aaKnown RBP eCLIP12.24□□□□□ -0.45
CAPN1-221ENST00000531068 NCBP1Q09161 790 aaKnown RBP12.24□□□□□ -0.45
CAPN1-221ENST00000531068 LAMTOR4Q0VGL1 99 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 MXD4Q14582 209 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-221ENST00000531068 PCBP1Q15365 356 aaKnown RBP eCLIP12.24□□□□□ -0.45
CAPN1-221ENST00000531068 ZNF174Q15697 407 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 TTC38Q5R3I4 469 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 L1TD1Q5T7N2 865 aaKnown RBP12.24□□□□□ -0.45
CAPN1-221ENST00000531068 FAM102BQ5T8I3 360 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 LARP1BQ659C4 914 aaKnown RBP12.24□□□□□ -0.45
CAPN1-221ENST00000531068 CATSPER4Q7RTX7 472 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 ECHDC2Q86YB7 292 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
CAPN1-221ENST00000531068 PPP2R3CQ969Q6 453 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 TMEM143Q96AN5 459 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 NLRP4Q96MN2 994 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 TRAIPQ9BWF2 469 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 TMEM60Q9H2L4 133 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 TUFT1Q9NNX1 390 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
CAPN1-221ENST00000531068 CHD7Q9P2D1 2997 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-221ENST00000531068 WNT7AO00755 349 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 GRM6O15303 877 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 CSDE1O75534 798 aaKnown RBP12.23□□□□□ -0.45
CAPN1-221ENST00000531068 SRGAP2CP0DJJ0 459 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 FGFR1P11362 822 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 FGFR4P22455 802 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 TECP42680 631 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 TFF2Q03403 129 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 UBE3AQ05086 875 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 POU5F1BQ06416 359 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 TFDP1Q14186 410 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 EMC2Q15006 297 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 KLHL23Q8NBE8 558 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 RNF169Q8NCN4 708 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 SPPL3Q8TCT6 385 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 ADAMTS19Q8TE59 1207 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 NACC1Q96RE7 527 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 MTRQ99707 1265 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 POLR3CQ9BUI4 534 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-221ENST00000531068 RAB34Q9BZG1 259 aa12.23□□□□□ -0.45
CAPN1-221ENST00000531068 ALG13Q9NP73 1137 aaKnown RBP12.23□□□□□ -0.45
CAPN1-221ENST00000531068 TYW1Q9NV66 732 aaKnown RBP12.23□□□□□ -0.45
CAPN1-221ENST00000531068 PUF60Q9UHX1 559 aaKnown RBP12.23□□□□□ -0.45
CAPN1-221ENST00000531068 CDH23Q9H251 3354 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 CARNS1A5YM72 827 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 GOLGA6L22H0YM25 854 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 ZBTB39O15060 712 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 F13A1P00488 732 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 ITGB1P05556 798 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 LAG3P18627 525 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 MUTP22033 750 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 PHKA2P46019 1235 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 GATMP50440 423 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 RAB27AP51159 221 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 RESTQ13127 1097 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 PDIA5Q14554 519 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 PUS10Q3MIT2 529 aaKnown RBP12.22□□□□□ -0.45
CAPN1-221ENST00000531068 TCEAL5Q5H9L2 206 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 TWF2Q6IBS0 349 aaKnown RBP12.22□□□□□ -0.45
CAPN1-221ENST00000531068 PDE12Q6L8Q7 609 aaKnown RBP12.22□□□□□ -0.45
CAPN1-221ENST00000531068 FERMT3Q86UX7 667 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 CATSPER3Q86XQ3 398 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 KSR1Q8IVT5 923 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 RNF149Q8NC42 400 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 PGBD4Q96DM1 585 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 UBE2ZQ9H832 354 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-221ENST00000531068 IFT122Q9HBG6 1241 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 PIN4Q9Y237 131 aaKnown RBP12.22□□□□□ -0.45
CAPN1-221ENST00000531068 COL4A6Q14031 1691 aa12.22□□□□□ -0.45
CAPN1-221ENST00000531068 POTEMA6NI47 508 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 H3BQV1 296 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 LAD1O00515 517 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 TRAK2O60296 914 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 ZNF623O75123 536 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 SPATA31C1P0DKV0 1188 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 RPA1P27694 616 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 RARRES1P49788 294 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
CAPN1-221ENST00000531068 KRT17Q04695 432 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms