RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 INTS8Q75QN2 995 aaKnown RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 DZIP1Q86YF9 867 aaKnown RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 GPIHBP1Q8IV16 184 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 SYT2Q8N9I0 419 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 RIN3Q8TB24 985 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 CKAP2Q8WWK9 683 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 TAF4BQ92750 862 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 NACC2Q96BF6 587 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 DGCR14Q96DF8 476 aaKnown RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 CRAMP1Q96RY5 1269 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 MIPEPQ99797 713 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 HAUS7Q99871 368 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 AP1M1Q9BXS5 423 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 PABPC3Q9H361 631 aaKnown RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 USP29Q9HBJ7 922 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 DDX18Q9NVP1 670 aaKnown RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 STX18Q9P2W9 335 aaKnown RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 CPDO75976 1380 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 E9PBE3 544 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 MYCLP1P12525 358 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-219ENST00000531050 MAP3K10Q02779 954 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 GFPT1Q06210 699 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-219ENST00000531050 TRIM29Q14134 588 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 KRT72Q14CN4 511 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 ADRM1Q16186 407 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 INAQ16352 499 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 RILPL1Q5EBL4 403 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 C6orf118Q5T5N4 469 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 ZNF658Q5TYW1 1059 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-219ENST00000531050 POTEEQ6S8J3 1075 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 PEX5LQ8IYB4 626 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 NUP93Q8N1F7 819 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 BBS5Q8N3I7 341 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 KBTBD3Q8NAB2 608 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 DTX3LQ8TDB6 740 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 EPS8L3Q8TE67 593 aaKnown RBP8.36□□□□□ -1.07
PTPRK-219ENST00000531050 IP6K1Q92551 441 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 SYMPKQ92797 1274 aaKnown RBP8.36□□□□□ -1.07
PTPRK-219ENST00000531050 NAP1L3Q99457 506 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-219ENST00000531050 CGREF1Q99674 301 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 CENPOQ9BU64 300 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 TPK1Q9H3S4 243 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 AMACRQ9UHK6 382 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 WASF2Q9Y6W5 498 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 PNPLA7Q6ZV29 1317 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 CES2O00748 559 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 FBP2O00757 339 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 EPHB6O15197 1021 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 TTI1O43156 1089 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 STRNO43815 780 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 ADAM23O75077 832 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 CBX6O95503 412 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 RXRAP19793 462 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 POLGP54098 1239 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-219ENST00000531050 HAND2P61296 217 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 MECOMQ03112 1051 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 MTFR1Q15390 333 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 NTRK3Q16288 839 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 ZNF394Q53GI3 561 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 DENND2CQ68D51 928 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 SCAIQ8N9R8 606 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 GDAP1Q8TB36 358 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 SREK1Q8WXA9 508 aaKnown RBP8.36□□□□□ -1.07
PTPRK-219ENST00000531050 ATP6V0A1Q93050 837 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 BHMTQ93088 406 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 SUCLG2Q96I99 432 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 PCMTD1Q96MG8 357 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-219ENST00000531050 PPP1R10Q96QC0 940 aaKnown RBP8.36□□□□□ -1.07
PTPRK-219ENST00000531050 FMO2Q99518 471 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 TUBGCP2Q9BSJ2 902 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 TMEM109Q9BVC6 243 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 STK33Q9BYT3 514 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 ZMYND12Q9H0C1 365 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 ZNF212Q9UDV6 495 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 CAMTA1Q9Y6Y1 1673 aa8.36□□□□□ -1.07
PTPRK-219ENST00000531050 DDX60Q8IY21 1712 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 DDX3XO00571 662 aaKnown RBP eCLIP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ZNF862O60290 1169 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ITGA4P13612 1032 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 METAP2P50579 478 aaKnown RBP eCLIP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 CCT8P50990 548 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 YARSP54577 528 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 PFKPQ01813 784 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 AUHQ13825 339 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 SPIDRQ14159 915 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 GRM2Q14416 872 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 NAB2Q15742 525 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 CCDC153Q494R4 210 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ZNF449Q6P9G9 518 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 VSTM1Q6UX27 236 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 UNC13DQ70J99 1090 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 RIC3Q7Z5B4 369 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 DIS3L2Q8IYB7 885 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ADSSL1Q8N142 457 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ACTRT1Q8TDG2 376 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 CASP10Q92851 521 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 CELF4Q9BZC1 486 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 CCDC113Q9H0I3 377 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 CUEDC2Q9H467 287 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 MLXIPLQ9NP71 852 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms