RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ATAD5Q96QE3 1844 aa6.15□□□□□ -1.43
PCF11-205ENST00000530906 CNTNAP1P78357 1384 aa6.15□□□□□ -1.43
PCF11-205ENST00000530906 BRCA1P38398 1863 aaKnown RBP6.15□□□□□ -1.43
PCF11-205ENST00000530906 RBBP6Q7Z6E9 1792 aaKnown RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP17L15C9J2P7 530 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP17L13C9JLJ4 530 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP17L11C9JVI0 530 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP17L18D6R9N7 530 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP17L22D6RA61 530 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP17L17D6RBQ6 530 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP17L19D6RCP7 530 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP17L20D6RJB6 530 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 WDR46O15213 610 aaKnown RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 ATP9BO43861 1147 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 NDUFA10O95299 355 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 EYA4O95677 639 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 PLA2G4BP0C869 781 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 IDEP14735 1019 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 DPEP1P16444 411 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 TRIM21P19474 475 aaKnown RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 KCNA3P22001 575 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 ANXA13P27216 316 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 POLD1P28340 1107 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 FXR1P51114 621 aaKnown RBP eCLIP6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP14P54578 494 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 GNG11P61952 73 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP17L24Q0WX57 530 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 COASYQ13057 564 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 PPP2R5CQ13362 524 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 ALCAMQ13740 583 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 NFIL3Q16649 462 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 BMT2Q1RMZ1 405 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 KIF4BQ2VIQ3 1234 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 VWA3BQ502W6 1294 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 HSP90AA4PQ58FG1 418 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 DALRD3Q5D0E6 543 aaKnown RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 DCAF15Q66K64 600 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 XRRA1Q6P2D8 792 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 USP17L6PQ6QN14 398 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 LRRC55Q6ZSA7 311 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 STXBP4Q6ZWJ1 553 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 GPBP1Q86WP2 473 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 SIX5Q8N196 739 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 CEP112Q8N8E3 955 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 SYT2Q8N9I0 419 aaPredicted RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 TSEN2Q8NCE0 465 aaKnown RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 MNS1Q8NEH6 495 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 LRRC15Q8TF66 581 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 SYN2Q92777 582 aaPredicted RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 LENG9Q96B70 501 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 NACC1Q96RE7 527 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 RIT2Q99578 217 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 CCDC94Q9BW85 323 aaPredicted RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 KRTAP9-2Q9BYQ4 174 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 TTYH3Q9C0H2 523 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 KIAA1683Q9H0B3 1180 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 TAOK3Q9H2K8 898 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 NDST4Q9H3R1 872 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 OLFML3Q9NRN5 406 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 ZNF215Q9UL58 517 aaPredicted RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 MYO6Q9UM54 1294 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 COL4A3BPQ9Y5P4 624 aa6.14□□□□□ -1.43
PCF11-205ENST00000530906 EPN1Q9Y6I3 576 aaPredicted RBP6.14□□□□□ -1.43
PCF11-205ENST00000530906 A0A1W2PRG0 241 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 TTC26A0AVF1 554 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 ANO9A1A5B4 782 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 CTAGE9A4FU28 777 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 TRIM49BA6NDI0 452 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 SOWAHDA6NJG2 315 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 FAM196BA6NMK8 535 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 EIF3CLB5ME19 914 aaKnown RBP6.13□□□□□ -1.43
PCF11-205ENST00000530906 TCP10L2B9ZVM9 353 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 PDXKO00764 312 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 CETN3O15182 167 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 EIF3DO15371 548 aaKnown RBP eCLIP6.13□□□□□ -1.43
PCF11-205ENST00000530906 SLC16A3O15427 465 aaKnown RBP6.13□□□□□ -1.43
PCF11-205ENST00000530906 ATP8B1O43520 1251 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 KRT86O43790 486 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 RAD21O60216 631 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 CTNND1O60716 968 aaKnown RBP6.13□□□□□ -1.43
PCF11-205ENST00000530906 RAD17O75943 681 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 ICAM1P05362 532 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 KRT18P05783 430 aaKnown RBP6.13□□□□□ -1.43
PCF11-205ENST00000530906 FCER1AP12319 257 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 CYP11B2P19099 503 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 RPL13P26373 211 aaKnown RBP6.13□□□□□ -1.43
PCF11-205ENST00000530906 ZNF76P36508 570 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 HSD17B4P51659 736 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 PMS1P54277 932 aaKnown RBP6.13□□□□□ -1.43
PCF11-205ENST00000530906 SLC12A3P55017 1021 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 WHAMMP3Q1A5X7 153 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 CEP55Q53EZ4 464 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 PRR16Q569H4 304 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 MIIPQ5JXC2 388 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 RAD9BQ6WBX8 426 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 TOGARAM2Q6ZUX3 1019 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 ILDR2Q71H61 639 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 PRPF38AQ8NAV1 312 aaKnown RBP6.13□□□□□ -1.43
PCF11-205ENST00000530906 SLC17A8Q8NDX2 589 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms