RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 CCDC151A5D8V7 595 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 PPFIA2O75334 1257 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 CASP8Q14790 479 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 DHX40Q8IX18 779 aaKnown RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 ZNF564Q8TBZ8 553 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 TRAIPQ9BWF2 469 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 FSD1LQ9BXM9 530 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 HPCAL4Q9UM19 191 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 WDR91A4D1P6 747 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 NSUN2Q08J23 767 aaKnown RBP eCLIP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 KIF19Q2TAC6 998 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 RHPN2Q8IUC4 686 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 PASD1Q8IV76 773 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 SP8Q8IXZ3 490 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 TTC39CQ8N584 583 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 ZBTB18Q99592 522 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 HACD3Q9P035 362 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 ORC4O43929 436 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 PSMC5P62195 406 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 NR1H3Q13133 447 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 PDCD2Q16342 344 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 HP1BP3Q5SSJ5 553 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 RNF219Q5W0B1 726 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 TMEM270Q6UE05 265 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 ZNF526Q8TF50 670 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 ISCA1Q9BUE6 129 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 FAM96AQ9H5X1 160 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 ABCF3Q9NUQ8 709 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 KLHL8Q9P2G9 620 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 FAF1Q9UNN5 650 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 AFF2P51816 1311 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 PNPLA7Q6ZV29 1317 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 POLR1AO95602 1720 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 POTEB3A0JP26 581 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 POTECB2RU33 542 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 COPEO14579 308 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 SNX2O60749 519 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 CSPG5O95196 566 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 LMNAP02545 664 aaKnown RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 CDC27P30260 824 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 GNA15P30679 374 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 POTEBQ6S5H4 581 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 RNF146Q9NTX7 359 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 KPNA7A9QM74 516 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 DNAJC8O75937 253 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 ATP1A3P13637 1013 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 QARSP47897 775 aaKnown RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 GCLMP48507 274 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 KCNH2Q12809 1159 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 TFDP2Q14188 446 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 SLFNL1Q499Z3 407 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 SWSAP1Q6NVH7 229 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L6PQ6QN14 398 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 EXT2Q93063 718 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 EIF2AK1Q9BQI3 630 aaKnown RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 TMEM60Q9H2L4 133 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 ACAD9Q9H845 621 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 TUFT1Q9NNX1 390 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 GABBR1Q9UBS5 961 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 SUGT1Q9Y2Z0 365 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 ANO9A1A5B4 782 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 SLC26A4O43511 780 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 KRT37O76014 449 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 ACSL3O95573 720 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 GGPS1O95749 300 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 MX2P20592 715 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 GCKP35557 465 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 STAT3P40763 770 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 USP11P51784 963 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 TAP1Q03518 808 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 SPARCL1Q14515 664 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 SCG3Q8WXD2 468 aaKnown RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 SPATA33Q96N06 139 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 WNT8AQ9H1J5 351 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 MRPL46Q9H2W6 279 aaKnown RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 E9PCH4 1651 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 SLC16A3O15427 465 aaKnown RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 FDX1P10109 184 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 NAALADL2Q58DX5 795 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 LRRC31Q6UY01 552 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 ENOSF1Q7L5Y1 443 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 FMR1NBQ8N0W7 255 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 LXNQ9BS40 222 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 TPX2Q9ULW0 747 aaKnown RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 FNDC3AQ9Y2H6 1198 aaKnown RBP9.05□□□□□ -0.96
CTNND1-227ENST00000530748 BCORL1Q5H9F3 1711 aa9.05□□□□□ -0.96
CTNND1-227ENST00000530748 ESRRAP11474 423 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms