RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 BSNDQ8WZ55 320 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 NLRP4Q96MN2 994 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SCLT1Q96NL6 688 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 KIFC3Q9BVG8 833 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TMEM106CQ9BVX2 250 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 FGFBP2Q9BYJ0 223 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 RBSNQ9H1K0 784 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CBX8Q9HC52 389 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 STARD7Q9NQZ5 370 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 OLFML3Q9NRN5 406 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 OGDHLQ9ULD0 1010 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PHF24Q9UPV7 400 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 NOD1Q9Y239 953 aa9.38□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 MCM3APO60318 1980 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SMIM35A0A1B0GVV1 85 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 A0A1W2PQ45 241 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 A0A1W2PQY0 241 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 DENND3A2RUS2 1198 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TREHO43280 583 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GJB1P08034 283 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 NAMPTP43490 491 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CASP5P51878 434 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 NCKAP1LP55160 1127 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TPM4P67936 248 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PAK1Q13153 545 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ALCAMQ13740 583 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 HIC1Q14526 733 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PTGISQ16647 500 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 COBLL1Q53SF7 1204 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GDF6Q6KF10 455 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 RUFY4Q6ZNE9 571 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ZBTB8OSQ8IWT0 167 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 KIAA0319LQ8IZA0 1049 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GUF1Q8N442 669 aaKnown RBP9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 AOPEPQ8N6M6 819 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 RNF149Q8NC42 400 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ZNF507Q8TCN5 953 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SCFD1Q8WVM8 642 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 P2RX5Q93086 422 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ZNF668Q96K58 619 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ACCSQ96QU6 501 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PPP1R16BQ96T49 567 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TSG101Q99816 390 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 BPIFA3Q9BQP9 254 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 NTPCRQ9BSD7 190 aaKnown RBP9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 MCOLN1Q9GZU1 580 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GTF2IRD1Q9UHL9 959 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 RWDD2AQ9UIY3 292 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 DOCK3Q8IZD9 2030 aa9.37□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GRIN2DO15399 1336 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CASP8AP2Q9UKL3 1982 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 A0A0U1RQG5 324 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 BICDL2A1A5D9 508 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 MBLAC1A4D2B0 266 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 K7ERI5 159 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 EIF3DO15371 548 aaKnown RBP eCLIP9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 VTNP04004 478 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CCNE1P24864 410 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ABCD1P33897 745 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PHKA2P46019 1235 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 NLRP11P59045 1033 aaKnown RBP9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GTF2BQ00403 316 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CDC42EP1Q00587 391 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 MYL5Q02045 173 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PTPN11Q06124 597 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TMEM62Q0P6H9 643 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 STRN3Q13033 797 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CAPSQ13938 189 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 KNOP1Q1ED39 458 aaKnown RBP9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ANKRD40Q6AI12 368 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 EPM2AIP1Q7L775 607 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 RSPH3Q86UC2 560 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 LUZP1Q86V48 1076 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SESTD1Q86VW0 696 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 DHX40Q8IX18 779 aaKnown RBP9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 NME8Q8N427 588 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 LINC01465Q8N7H1 131 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TMEM161BQ8NDZ6 487 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 DNAJB3Q8WWF6 145 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 FIZ1Q96SL8 496 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SENP6Q9GZR1 1112 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 C2orf40Q9H1Z8 148 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SEMA6BQ9H3T3 888 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TMEM206Q9H813 350 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TBX20Q9UMR3 447 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 EXOC7Q9UPT5 735 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GINS2Q9Y248 185 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 DOCK5Q9H7D0 1870 aa9.36□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 UBE4BO95155 1302 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 A0A087WZ62 844 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ARVCFO00192 962 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CALUO43852 315 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SCP2P22307 547 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 HOXD13P35453 343 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 EFNA5P52803 228 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ADAM17P78536 824 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 KCNA1Q09470 495 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms