RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 VWA3AA6NCI4 1184 aa18.75■□□□□ 0.59
SF3B2-209ENST00000530322 RFXAPO00287 272 aa18.75■□□□□ 0.59
SF3B2-209ENST00000530322 BMP15O95972 392 aa18.75■□□□□ 0.59
SF3B2-209ENST00000530322 SRGAP2CP0DJJ0 459 aa18.75■□□□□ 0.59
SF3B2-209ENST00000530322 ZSCAN20P17040 1043 aaPredicted RBP18.75■□□□□ 0.59
SF3B2-209ENST00000530322 SFPQP23246 707 aaKnown RBP eCLIP18.75■□□□□ 0.59
SF3B2-209ENST00000530322 ARL2P36404 184 aa18.75■□□□□ 0.59
SF3B2-209ENST00000530322 SF3A1Q15459 793 aaKnown RBP18.75■□□□□ 0.59
SF3B2-209ENST00000530322 KRT79Q5XKE5 535 aa18.75■□□□□ 0.59
SF3B2-209ENST00000530322 SRGAP1Q7Z6B7 1085 aa18.75■□□□□ 0.59
SF3B2-209ENST00000530322 RNF149Q8NC42 400 aa18.75■□□□□ 0.59
SF3B2-209ENST00000530322 KIAA1024Q9UPX6 916 aa18.75■□□□□ 0.59
SF3B2-209ENST00000530322 ARHGEF35A5YM69 484 aa18.74■□□□□ 0.59
SF3B2-209ENST00000530322 LINC00271P0C7V0 271 aa18.74■□□□□ 0.59
SF3B2-209ENST00000530322 PADI6Q6TGC4 694 aa18.74■□□□□ 0.59
SF3B2-209ENST00000530322 ASAP3Q8TDY4 903 aa18.74■□□□□ 0.59
SF3B2-209ENST00000530322 C17orf80Q9BSJ5 609 aa18.74■□□□□ 0.59
SF3B2-209ENST00000530322 ELAC1Q9H777 363 aaKnown RBP18.74■□□□□ 0.59
SF3B2-209ENST00000530322 MINDY3Q9H8M7 445 aa18.74■□□□□ 0.59
SF3B2-209ENST00000530322 CHST12Q9NRB3 414 aa18.74■□□□□ 0.59
SF3B2-209ENST00000530322 RNF216Q9NWF9 866 aaPredicted RBP18.74■□□□□ 0.59
SF3B2-209ENST00000530322 LRFN2Q9ULH4 789 aa18.74■□□□□ 0.59
SF3B2-209ENST00000530322 PCDHB7Q9Y5E2 793 aa18.74■□□□□ 0.59
SF3B2-209ENST00000530322 MYH15Q9Y2K3 1946 aa18.74■□□□□ 0.59
SF3B2-209ENST00000530322 REV3LO60673 3130 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 HSP90AA1P07900 732 aaKnown RBP18.73■□□□□ 0.59
SF3B2-209ENST00000530322 GLRA2P23416 452 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 POU5F1BQ06416 359 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 CAPSQ13938 189 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 HYIQ5T013 277 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 FAM173BQ6P4H8 233 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 FIBCD1Q8N539 461 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 MCPH1Q8NEM0 835 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 MAFAQ8NHW3 353 aaPredicted RBP18.73■□□□□ 0.59
SF3B2-209ENST00000530322 POLR3FQ9H1D9 316 aaPredicted RBP18.73■□□□□ 0.59
SF3B2-209ENST00000530322 BHMT2Q9H2M3 363 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 ZSCAN16Q9H4T2 348 aaPredicted RBP18.73■□□□□ 0.59
SF3B2-209ENST00000530322 GPRC5CQ9NQ84 441 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 TMEM161AQ9NX61 479 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 MTUS1Q9ULD2 1270 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 CLIC4Q9Y696 253 aa18.73■□□□□ 0.59
SF3B2-209ENST00000530322 KIAA1671Q9BY89 1806 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 LPXNO60711 386 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 CYP11B2P19099 503 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 POU3F3P20264 500 aaPredicted RBP18.72■□□□□ 0.59
SF3B2-209ENST00000530322 IBSPP21815 317 aaPredicted RBP18.72■□□□□ 0.59
SF3B2-209ENST00000530322 PHKA2P46019 1235 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 GATMP50440 423 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 PTENP60484 403 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 TFDP1Q14186 410 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 BTG3Q14201 252 aaPredicted RBP18.72■□□□□ 0.59
SF3B2-209ENST00000530322 PTPAQ15257 358 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 MAEAQ7L5Y9 396 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 CATSPER4Q7RTX7 472 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 KCNK18Q7Z418 384 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 ECHDC2Q86YB7 292 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 IFNLR1Q8IU57 520 aaPredicted RBP18.72■□□□□ 0.59
SF3B2-209ENST00000530322 CMTR2Q8IYT2 770 aaKnown RBP18.72■□□□□ 0.59
SF3B2-209ENST00000530322 AK8Q96MA6 479 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 SAMD11Q96NU1 681 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 TRAIPQ9BWF2 469 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 DACT1Q9NYF0 836 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 DNM3Q9UQ16 869 aa18.72■□□□□ 0.59
SF3B2-209ENST00000530322 A0A0U1RQF3 1178 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 E9PMD0 336 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 EYA4O95677 639 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 IGFBP4P22692 258 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 GRB10Q13322 594 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 EPC2Q52LR7 807 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 TMEM192Q8IY95 271 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 FBXO22Q8NEZ5 403 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 GDPD5Q8WTR4 605 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 CLP1Q92989 425 aaKnown RBP18.71■□□□□ 0.59
SF3B2-209ENST00000530322 PNMA5Q96PV4 448 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 NFKBIZQ9BYH8 718 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 AGPAT5Q9NUQ2 364 aa18.71■□□□□ 0.59
SF3B2-209ENST00000530322 PIN4Q9Y237 131 aaKnown RBP18.71■□□□□ 0.59
SF3B2-209ENST00000530322 PRRC2BQ5JSZ5 2229 aaKnown RBP18.7■□□□□ 0.58
SF3B2-209ENST00000530322 FGFR1P11362 822 aa18.7■□□□□ 0.58
SF3B2-209ENST00000530322 HOXA11P31270 313 aaPredicted RBP18.7■□□□□ 0.58
SF3B2-209ENST00000530322 GRIN1Q05586 938 aa18.7■□□□□ 0.58
SF3B2-209ENST00000530322 PAN2Q504Q3 1202 aaKnown RBP18.7■□□□□ 0.58
SF3B2-209ENST00000530322 FAM102BQ5T8I3 360 aa18.7■□□□□ 0.58
SF3B2-209ENST00000530322 KCTD17Q8N5Z5 321 aa18.7■□□□□ 0.58
SF3B2-209ENST00000530322 NT5C3AQ9H0P0 336 aa18.7■□□□□ 0.58
SF3B2-209ENST00000530322 RNF19AQ9NV58 838 aa18.7■□□□□ 0.58
SF3B2-209ENST00000530322 MRPL42Q9Y6G3 142 aaKnown RBP18.7■□□□□ 0.58
SF3B2-209ENST00000530322 C5orf67F2Z3F1 127 aa18.69■□□□□ 0.58
SF3B2-209ENST00000530322 SLC26A4O43511 780 aa18.69■□□□□ 0.58
SF3B2-209ENST00000530322 EOMESO95936 686 aa18.69■□□□□ 0.58
SF3B2-209ENST00000530322 PDIA4P13667 645 aaKnown RBP18.69■□□□□ 0.58
SF3B2-209ENST00000530322 ATF7P17544 494 aaPredicted RBP18.69■□□□□ 0.58
SF3B2-209ENST00000530322 LONP1P36776 959 aaKnown RBP18.69■□□□□ 0.58
SF3B2-209ENST00000530322 PCBP1Q15365 356 aaKnown RBP eCLIP18.69■□□□□ 0.58
SF3B2-209ENST00000530322 ZRSR1Q15695 479 aaKnown RBP18.69■□□□□ 0.58
SF3B2-209ENST00000530322 TMEM119Q4V9L6 283 aa18.69■□□□□ 0.58
SF3B2-209ENST00000530322 TWF2Q6IBS0 349 aaKnown RBP18.69■□□□□ 0.58
SF3B2-209ENST00000530322 ZNF598Q86UK7 904 aaKnown RBP18.69■□□□□ 0.58
SF3B2-209ENST00000530322 CABP7Q86V35 215 aa18.69■□□□□ 0.58
SF3B2-209ENST00000530322 SPRYD3Q8NCJ5 442 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms