RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 RTFDC1Q9BY42 306 aaPredicted RBP10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 CA4P22748 312 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 NPEPPSP55786 919 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 CORO7P57737 925 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 TFAMQ00059 246 aaKnown RBP10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 RASA3Q14644 834 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 RFFLQ8WZ73 363 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 N4BP2L2Q92802 583 aaPredicted RBP10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 HVCN1Q96D96 273 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 SMC6Q96SB8 1091 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 IWS1Q96ST2 819 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 KIFC3Q9BVG8 833 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 HAUS2Q9NVX0 235 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 CLDN3O15551 220 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 FMO5P49326 533 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 FXR2P51116 673 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 USP11P51784 963 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 AP3B2Q13367 1082 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 LONRF1Q17RB8 773 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 C6orf163Q5TEZ5 329 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 SEPT14Q6ZU15 432 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 SPATS2Q86XZ4 545 aaKnown RBP10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 TRIM59Q8IWR1 403 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 ZNF564Q8TBZ8 553 aaPredicted RBP10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 ZNF507Q8TCN5 953 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 PI4K2AQ9BTU6 479 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 THAP2Q9H0W7 228 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 EPN3Q9H201 632 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 EFCC1Q9HA90 598 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 ALG6Q9Y672 507 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 EXOC1LA0A1B0GW35 172 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 CCDC160A6NGH7 325 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 FOXN3O00409 490 aaPredicted RBP10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 PDXKO00764 312 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 ATP2A2P16615 1042 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 HSPA1LP34931 641 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 ECE1P42892 770 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 CASP5P51878 434 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 PRELPP51888 382 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 IRX4P78413 519 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 SLC29A2Q14542 456 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 FRMD5Q7Z6J6 570 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 STMN2Q93045 179 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 RILPQ96NA2 401 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 MYCBPQ99417 103 aaPredicted RBP10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 CALN1Q9BXU9 219 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 EDEM3Q9BZQ6 932 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 MAGED2Q9UNF1 606 aaPredicted RBP10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 A0A1W2PQJ5 194 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 DENND3A2RUS2 1198 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 GRID2IPA4D2P6 1211 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 SPAG7O75391 227 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 SYF2O95926 243 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 PON1P27169 355 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 BBS9Q3SYG4 887 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 FYB2Q5VWT5 728 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 ANKRD35Q8N283 1001 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 RUNDC3BQ96NL0 473 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 ALG13Q9NP73 1137 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 TXNDC16Q9P2K2 825 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 INTUQ9ULD6 942 aa10.65□□□□□ -0.7
CCDC90B-214ENST00000529689 ZNF263O14978 683 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 BRAFP15056 766 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 MARK3P27448 753 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 PBX1P40424 430 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 PPP4CP60510 307 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 CEP55Q53EZ4 464 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 MIIPQ5JXC2 388 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 PPP1R18Q6NYC8 613 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 HAUS6Q7Z4H7 955 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 ZFPM1Q8IX07 1006 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 NIM1KQ8IY84 436 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 RMDN3Q96TC7 470 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 FGFBP2Q9BYJ0 223 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 DDX4Q9NQI0 724 aaKnown RBP10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 PRR12Q9ULL5 1215 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 TTLL3Q9Y4R7 772 aa10.65□□□□□ -0.71
CCDC90B-214ENST00000529689 SYNJ2BP-COX16A0A087WUM0 186 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 ECE2O60344 883 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 SRGAP2CP0DJJ0 459 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 YWHAGP61981 247 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 MTMR1Q13613 665 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 SHROOM1Q2M3G4 852 aaPredicted RBP10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 PLA2G4FQ68DD2 849 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 RHOT2Q8IXI1 618 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 ACER1Q8TDN7 264 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 LRRC8CQ8TDW0 803 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 CPA5Q8WXQ8 436 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 PRMT1Q99873 361 aaKnown RBP10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 GPRC5CQ9NQ84 441 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 KCNQ5Q9NR82 932 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 COX16Q9P0S2 106 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 EYA4O95677 639 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 CHN1P15882 459 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 BASP1P80723 227 aaKnown RBP10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 NEDD9Q14511 834 aa10.64□□□□□ -0.71
CCDC90B-214ENST00000529689 TMEM270Q6UE05 265 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms