RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 ADAMTS10Q9H324 1103 aa12.64□□□□□ -0.39
CHD7-209ENST00000529472 ZHX3Q9H4I2 956 aa12.64□□□□□ -0.39
CHD7-209ENST00000529472 KBTBD4Q9NVX7 518 aa12.64□□□□□ -0.39
CHD7-209ENST00000529472 NBNO60934 754 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 TBCAO75347 108 aaKnown RBP12.63□□□□□ -0.39
CHD7-209ENST00000529472 NR1I2O75469 434 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 CSDE1O75534 798 aaKnown RBP12.63□□□□□ -0.39
CHD7-209ENST00000529472 FAM13AO94988 1023 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 CSF2RAP15509 400 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 CASP1P29466 404 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 CRYBB1P53674 252 aaPredicted RBP12.63□□□□□ -0.39
CHD7-209ENST00000529472 AMPD3Q01432 767 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 FPGSQ05932 587 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 MAPK7Q13164 816 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
CHD7-209ENST00000529472 GIT2Q14161 759 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 TFDP1Q14186 410 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 FMR1NBQ8N0W7 255 aaPredicted RBP12.63□□□□□ -0.39
CHD7-209ENST00000529472 DAW1Q8N136 415 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 PAGE5Q96GU1 130 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 IFT74Q96LB3 600 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 KIFC3Q9BVG8 833 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 OSBPL7Q9BZF2 842 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 USP25Q9UHP3 1055 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 LAMA3Q16787 3333 aa12.63□□□□□ -0.39
CHD7-209ENST00000529472 ASAP2O43150 1006 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 IDEP14735 1019 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 RFC2P35250 354 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 MAGEA10P43363 369 aaPredicted RBP12.62□□□□□ -0.39
CHD7-209ENST00000529472 PHKA2P46019 1235 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 PEX3P56589 373 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 ASIC1P78348 528 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 CDC42EP1Q00587 391 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 DMP1Q13316 513 aaPredicted RBP12.62□□□□□ -0.39
CHD7-209ENST00000529472 SNW1Q13573 536 aaKnown RBP12.62□□□□□ -0.39
CHD7-209ENST00000529472 LPIN1Q14693 890 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 GPNMBQ14956 572 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 PPP2R5AQ15172 486 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 FBXO47Q5MNV8 452 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 KRBA2Q6ZNG9 492 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 ZNF410Q86VK4 478 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 ZNF710Q8N1W2 664 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 ENGASEQ8NFI3 743 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 DEPTORQ8TB45 409 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 TMEM40Q8WWA1 233 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 GCOM2Q9BZD3 368 aaPredicted RBP12.62□□□□□ -0.39
CHD7-209ENST00000529472 TRIM9Q9C026 710 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 LRRC27Q9C0I9 530 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 BLZF1Q9H2G9 400 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 LMBRD1Q9NUN5 540 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 ODF2LQ9ULJ1 636 aa12.62□□□□□ -0.39
CHD7-209ENST00000529472 TET1Q8NFU7 2136 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 CCDC169A6NNP5 214 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 KINO60870 393 aaKnown RBP12.61□□□□□ -0.39
CHD7-209ENST00000529472 PARNO95453 639 aaKnown RBP12.61□□□□□ -0.39
CHD7-209ENST00000529472 ACRP10323 421 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 PLS3P13797 630 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 DARSP14868 501 aaKnown RBP12.61□□□□□ -0.39
CHD7-209ENST00000529472 FGFR4P22455 802 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 EIF4BP23588 611 aaKnown RBP12.61□□□□□ -0.39
CHD7-209ENST00000529472 CD52P31358 61 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 NAMPTP43490 491 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 NPTX2P47972 431 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 PAK2Q13177 524 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHD7-209ENST00000529472 CUL4BQ13620 913 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 TSHZ1Q6ZSZ6 1077 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 ZBTB8OSQ8IWT0 167 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 MYCT1Q8N699 235 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 IFIH1Q9BYX4 1025 aaKnown RBP12.61□□□□□ -0.39
CHD7-209ENST00000529472 MINDY3Q9H8M7 445 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 AGO3Q9H9G7 860 aaKnown RBP12.61□□□□□ -0.39
CHD7-209ENST00000529472 IFT122Q9HBG6 1241 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 PARVGQ9HBI0 331 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 DACT1Q9NYF0 836 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 NOC2LQ9Y3T9 749 aaKnown RBP12.61□□□□□ -0.39
CHD7-209ENST00000529472 ADGRA3Q8IWK6 1321 aa12.61□□□□□ -0.39
CHD7-209ENST00000529472 INO80B-WBP1J3KQ70 363 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 RPS6KA5O75582 802 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 CXCL10P02778 98 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 ZNF131P52739 623 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 EPHB4P54760 987 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 PTENP60484 403 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 NFX1Q12986 1120 aaKnown RBP12.6□□□□□ -0.39
CHD7-209ENST00000529472 ODR4Q5SWX8 454 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 CDCA2Q69YH5 1023 aaPredicted RBP12.6□□□□□ -0.39
CHD7-209ENST00000529472 FAM228AQ86W67 206 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 SFR1Q86XK3 245 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 CCDC65Q8IXS2 484 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 RPUSD2Q8IZ73 545 aaKnown RBP12.6□□□□□ -0.39
CHD7-209ENST00000529472 VWCEQ96DN2 955 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 CCDC34Q96HJ3 373 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 C7orf25Q9BPX7 421 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 INO80BQ9C086 356 aaPredicted RBP12.6□□□□□ -0.39
CHD7-209ENST00000529472 C17orf75Q9HAS0 396 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 IL23AQ9NPF7 189 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 KMT5AQ9NQR1 393 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 PANK4Q9NVE7 773 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms