RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 DNM2P50570 870 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 CAPSQ13938 189 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 EPM2AIP1Q7L775 607 aaPredicted RBP27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 NELFCDQ8IXH7 590 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 TCP11Q8WWU5 503 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 IFT74Q96LB3 600 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 NTPCRQ9BSD7 190 aaKnown RBP27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 RBSNQ9H1K0 784 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 C17orf75Q9HAS0 396 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 STARD7Q9NQZ5 370 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 AKT3Q9Y243 479 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 KAT6AQ92794 2004 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 EVPLQ92817 2033 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 K7ENM7 598 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 MNX1P50219 401 aaPredicted RBP27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 PMS1P54277 932 aaKnown RBP27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 STX17P56962 302 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 TMEM161BQ8NDZ6 487 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 CTAGE1Q96RT6 745 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 KMT5AQ9NQR1 393 aa27.27■■□□□ 1.96
LDLRAD3-203ENST00000528989 LRRIQ4A6NIV6 560 aa27.26■■□□□ 1.95
LDLRAD3-203ENST00000528989 CYP2C9P11712 490 aa27.26■■□□□ 1.95
LDLRAD3-203ENST00000528989 TMOD1P28289 359 aa27.26■■□□□ 1.95
LDLRAD3-203ENST00000528989 TMEM62Q0P6H9 643 aa27.26■■□□□ 1.95
LDLRAD3-203ENST00000528989 HAUS6Q7Z4H7 955 aa27.26■■□□□ 1.95
LDLRAD3-203ENST00000528989 STRA6Q9BX79 667 aa27.26■■□□□ 1.95
LDLRAD3-203ENST00000528989 CTNND2Q9UQB3 1225 aa27.26■■□□□ 1.95
LDLRAD3-203ENST00000528989 GNAT1P11488 350 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 NCKAP1LP55160 1127 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 MYOCDQ8IZQ8 938 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 RNF149Q8NC42 400 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 DNAJB3Q8WWF6 145 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 SPIRE2Q8WWL2 714 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 NLRP4Q96MN2 994 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 CBX8Q9HC52 389 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 MYH11P35749 1972 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 TRIP12Q14669 1992 aaPredicted RBP27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 SMTNP53814 917 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 MXD4Q14582 209 aaPredicted RBP27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 L1TD1Q5T7N2 865 aaKnown RBP27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 LUZP1Q86V48 1076 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 SESTD1Q86VW0 696 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 NELFBQ8WX92 580 aa27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 TRMT13Q9NUP7 481 aaKnown RBP27.25■■□□□ 1.95
LDLRAD3-203ENST00000528989 TRIM49BA6NDI0 452 aa27.24■■□□□ 1.95
LDLRAD3-203ENST00000528989 PPP1R37O75864 691 aa27.24■■□□□ 1.95
LDLRAD3-203ENST00000528989 GUF1Q8N442 669 aaKnown RBP27.24■■□□□ 1.95
LDLRAD3-203ENST00000528989 WNT8BQ93098 351 aa27.24■■□□□ 1.95
LDLRAD3-203ENST00000528989 SEMA6BQ9H3T3 888 aa27.24■■□□□ 1.95
LDLRAD3-203ENST00000528989 NAMPTP43490 491 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 GJA8P48165 433 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 COBLL1Q53SF7 1204 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 ZNF507Q8TCN5 953 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 SENP6Q9GZR1 1112 aaPredicted RBP27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 KIAA0100Q14667 2235 aaKnown RBP27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 SMIM35A0A1B0GVV1 85 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 DENND3A2RUS2 1198 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 CSDE1O75534 798 aaKnown RBP27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 MAPTP10636 758 aaKnown RBP27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 IQCB1Q15051 598 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 PTGISQ16647 500 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 TAS1R3Q7RTX0 852 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 DHX40Q8IX18 779 aaKnown RBP27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 DIS3LQ8TF46 1054 aaKnown RBP27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 NAT10Q9H0A0 1025 aaKnown RBP27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 ARHGAP28Q9P2N2 729 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 DACH1Q9UI36 760 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 USP20Q9Y2K6 914 aa27.23■■□□□ 1.95
LDLRAD3-203ENST00000528989 NLRP11P59045 1033 aaKnown RBP27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 GTF2BQ00403 316 aa27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 PAK1Q13153 545 aa27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 STIM1Q13586 685 aa27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 PPP2R5AQ15172 486 aa27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 AOPEPQ8N6M6 819 aa27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 DEPTORQ8TB45 409 aa27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 FAM200AQ8TCP9 573 aa27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 EEF2KMTQ96G04 330 aa27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 MAP7D2Q96T17 732 aa27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 GTPBP4Q9BZE4 634 aaKnown RBP27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 PCDHB13Q9Y5F0 798 aa27.22■■□□□ 1.95
LDLRAD3-203ENST00000528989 PSMA7O14818 248 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 KIZQ2M2Z5 673 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 ANKRD40Q6AI12 368 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 SLC43A3Q8NBI5 491 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 DHTKD1Q96HY7 919 aaPredicted RBP27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 TRPV6Q9H1D0 765 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 ST6GALNAC4Q9H4F1 302 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 CDHR5Q9HBB8 845 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 IFT122Q9HBG6 1241 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 GINS2Q9Y248 185 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 A0A087WZ62 844 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 A0A0U1RQG5 324 aaPredicted RBP27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 ERCC5P28715 1186 aaPredicted RBP27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 KNOP1Q1ED39 458 aaKnown RBP27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 FDXACB1Q9BRP7 624 aaPredicted RBP27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 KCTD10Q9H3F6 313 aa27.21■■□□□ 1.95
LDLRAD3-203ENST00000528989 EIF3DO15371 548 aaKnown RBP eCLIP27.2■■□□□ 1.94
LDLRAD3-203ENST00000528989 ASAP2O43150 1006 aa27.2■■□□□ 1.94
LDLRAD3-203ENST00000528989 GPC3P51654 580 aa27.2■■□□□ 1.94
LDLRAD3-203ENST00000528989 BMT2Q1RMZ1 405 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms