RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	TPRN	Q4KMQ1	711 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	LRCH2	Q5VUJ6	765 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	KANK3	Q6NY19	840 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	BLOC1S2	Q6QNY1	142 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	ZNF598	Q86UK7	904 aa	Known RBP	12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	TMEM87A	Q8NBN3	555 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	SLC5A5	Q92911	643 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	RIPOR3	Q96MK2	946 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	RIT2	Q99578	217 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	TEKT3	Q9BXF9	490 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	GCOM2	Q9BZD3	368 aa	Predicted RBP	12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	ADAM7	Q9H2U9	754 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	DACT1	Q9NYF0	836 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	NR2E1	Q9Y466	385 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	HCFC2	Q9Y5Z7	792 aa		12.82	□□□□□ -0.36
PTP4A2-211	ENST00000528840	DDX11L8	A8MPP1	907 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	PDGFB	P01127	241 aa	Predicted RBP	12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	WEE2	P0C1S8	567 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	SFN	P31947	248 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	CDC42EP1	Q00587	391 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	TARBP2	Q15633	366 aa	Known RBP	12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	NTRK3	Q16288	839 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	MTERF2	Q49AM1	385 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	MIER3	Q7Z3K6	550 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	C12orf76	Q8N812	135 aa	Predicted RBP	12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	KREMEN2	Q8NCW0	462 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	ATOH1	Q92858	354 aa	Predicted RBP	12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	KCNB2	Q92953	911 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	SH2D3A	Q9BRG2	576 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	NIFK	Q9BYG3	293 aa	Known RBP	12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	CHST12	Q9NRB3	414 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	FAM86C1	Q9NVL1	165 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840	SNX14	Q9Y5W7	946 aa		12.81	□□□□□ -0.36
PTP4A2-211	ENST00000528840		A0A087WZ62	844 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	TMEM150B	A6NC51	233 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	RPS6KB1	P23443	525 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	PDIA3	P30101	505 aa	Known RBP	12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	DNM2	P50570	870 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	JAK3	P52333	1124 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	ITIH3	Q06033	890 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	RARS2	Q5T160	578 aa	Known RBP	12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	VPS52	Q8N1B4	723 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	CCDC148	Q8NFR7	591 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	TBCK	Q8TEA7	893 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	AUTS2	Q8WXX7	1259 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	LPP	Q93052	612 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	TMEM169	Q96HH4	297 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	FDXACB1	Q9BRP7	624 aa	Predicted RBP	12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	RNF26	Q9BY78	433 aa	Predicted RBP	12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	POMK	Q9H5K3	350 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	NCOA5	Q9HCD5	579 aa	Known RBP	12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	SUCLA2	Q9P2R7	463 aa	Predicted RBP	12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	LIMD1	Q9UGP4	676 aa		12.8	□□□□□ -0.36
PTP4A2-211	ENST00000528840	C2CD4D	B7Z1M9	353 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840		H0Y858	1186 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	PSMD10	O75832	226 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	STBD1	O95210	358 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	IFNAR1	P17181	557 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	HSPA4	P34932	840 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	PHKA2	P46019	1235 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	XKR3	Q5GH77	459 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	ATAT1	Q5SQI0	421 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	TWF2	Q6IBS0	349 aa	Known RBP	12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	RHPN2	Q8IUC4	686 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	KSR1	Q8IVT5	923 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	NECTIN4	Q96NY8	510 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	MRPL9	Q9BYD2	267 aa	Known RBP	12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	IRF2BPL	Q9H1B7	796 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	INPP5F	Q9Y2H2	1132 aa		12.79	□□□□□ -0.36
PTP4A2-211	ENST00000528840	ZNF318	Q5VUA4	2279 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	OFD1	O75665	1012 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	TDP2	O95551	362 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	BRD1	O95696	1058 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	ASGR2	P07307	311 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	GALT	P07902	379 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	SKI	P12755	728 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	EPCAM	P16422	314 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	PSMA5	P28066	241 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	MTHFR	P42898	656 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	RNASEL	Q05823	741 aa	Known RBP	12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	SSRP1	Q08945	709 aa	Known RBP	12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840		Q4G0T1	1027 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	NOMO2	Q5JPE7	1267 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	GLB1L	Q6UWU2	654 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	TMEM173	Q86WV6	379 aa	Predicted RBP	12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	UBALD2	Q8IYN6	164 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	FBXL16	Q8N461	479 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	RDM1	Q8NG50	284 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	CEP89	Q96ST8	783 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	LARP6	Q9BRS8	491 aa	Known RBP	12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	INO80B	Q9C086	356 aa	Predicted RBP	12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	GBP3	Q9H0R5	595 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	SMOC2	Q9H3U7	446 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	NRDE2	Q9H7Z3	1164 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	SH3GLB2	Q9NR46	395 aa		12.78	□□□□□ -0.36
PTP4A2-211	ENST00000528840	DBR1	Q9UK59	544 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms