RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 LBHD1Q9BQE6 289 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 NTPCRQ9BSD7 190 aaKnown RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 CELF4Q9BZC1 486 aaKnown RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 NAT10Q9H0A0 1025 aaKnown RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 POLR3FQ9H1D9 316 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 HIPK3Q9H422 1215 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 CLSTN2Q9H4D0 955 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 ST6GALNAC4Q9H4F1 302 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 ZHX3Q9H4I2 956 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 TMEM134Q9H6X4 195 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 MRPL44Q9H9J2 332 aaKnown RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 PDLIM7Q9NR12 457 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 CHST12Q9NRB3 414 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 WRAP73Q9P2S5 460 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 CARNS1A5YM72 827 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 LRRIQ4A6NIV6 560 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 KIAA0355O15063 1070 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 EIF3DO15371 548 aaKnown RBP eCLIP8.74□□□□□ -1.01
SSBP3-211ENST00000528787 B4GALT4O60513 344 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 RHOBTB3O94955 611 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 FGFR1OPO95684 399 aaKnown RBP8.74□□□□□ -1.01
SSBP3-211ENST00000528787 RPN1P04843 607 aaKnown RBP8.74□□□□□ -1.01
SSBP3-211ENST00000528787 RAG1P15918 1043 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 ZSCAN20P17040 1043 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-211ENST00000528787 EIF4BP23588 611 aaKnown RBP8.74□□□□□ -1.01
SSBP3-211ENST00000528787 AFMP43652 599 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 NLRP11P59045 1033 aaKnown RBP8.74□□□□□ -1.01
SSBP3-211ENST00000528787 TLE2Q04725 743 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 GIT2Q14161 759 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 ECM1Q16610 540 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 TRIM60Q495X7 471 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 TPRNQ4KMQ1 711 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 MARCH8Q5T0T0 291 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 SLFN12LQ6IEE8 588 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 LRRC8DQ7L1W4 858 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 HS2ST1Q7LGA3 356 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 DYMQ7RTS9 669 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 SH3RF1Q7Z6J0 888 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 UBE2Q1Q7Z7E8 422 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 USP37Q86T82 979 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 KIAA0319LQ8IZA0 1049 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 RNF149Q8NC42 400 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 DNAJB3Q8WWF6 145 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 SEPT8Q92599 483 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 DPF3Q92784 378 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 CEP89Q96ST8 783 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 REEP2Q9BRK0 252 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 ADPGKQ9BRR6 497 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 FAM49AQ9H0Q0 323 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-211ENST00000528787 GOLPH3LQ9H4A5 285 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 KIAA1468Q9P260 1216 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 GRIN2DO15399 1336 aa8.74□□□□□ -1.01
SSBP3-211ENST00000528787 CENPFP49454 3210 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 BICDL2A1A5D9 508 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 FRMD3A2A2Y4 597 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 MYMKA6NI61 221 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 K7ENM7 598 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 PSMA7O14818 248 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 GADD45BO75293 160 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-211ENST00000528787 RPS6KA5O75582 802 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 TIMP1P01033 207 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 CKBP12277 381 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 RPL13P26373 211 aaKnown RBP8.73□□□□□ -1.01
SSBP3-211ENST00000528787 MNX1P50219 401 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-211ENST00000528787 RAB27AP51159 221 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 GPC3P51654 580 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 PEX3P56589 373 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 PTENP60484 403 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 FAAP100Q0VG06 881 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 DPYDQ12882 1025 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 PAK2Q13177 524 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 PPIGQ13427 754 aaKnown RBP eCLIP8.73□□□□□ -1.01
SSBP3-211ENST00000528787 FAM187BQ17R55 369 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 COBLL1Q53SF7 1204 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 FAM26FQ5R3K3 315 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 NT5DC1Q5TFE4 455 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 ZNF658Q5TYW1 1059 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-211ENST00000528787 CDCA2Q69YH5 1023 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-211ENST00000528787 PPP4R3CPQ6ZMV5 832 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 TSHZ1Q6ZSZ6 1077 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 KCNK18Q7Z418 384 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 SYCP3Q8IZU3 236 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 LRRC71Q8N4P6 559 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 LINC01465Q8N7H1 131 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 MLKLQ8NB16 471 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 DIS3LQ8TF46 1054 aaKnown RBP8.73□□□□□ -1.01
SSBP3-211ENST00000528787 TMEM143Q96AN5 459 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 NLRP4Q96MN2 994 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 ACCSQ96QU6 501 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 TSG101Q99816 390 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 RUSC1Q9BVN2 902 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 MRPL4Q9BYD3 311 aaKnown RBP8.73□□□□□ -1.01
SSBP3-211ENST00000528787 C1orf112Q9NSG2 853 aa8.73□□□□□ -1.01
SSBP3-211ENST00000528787 TRMT13Q9NUP7 481 aaKnown RBP8.73□□□□□ -1.01
SSBP3-211ENST00000528787 TANC1Q9C0D5 1861 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 A0A087X0B3 334 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 INO80B-WBP1J3KQ70 363 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 N4BP3O15049 544 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 CALUO43852 315 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms