RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 SPIRE1Q08AE8 756 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 SMAD4Q13485 552 aaKnown RBP12.98□□□□□ -0.33
SRPRA-203ENST00000528744 DUSP6Q16828 381 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 ODR4Q5SWX8 454 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 KCNT2Q6UVM3 1135 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 TMEM173Q86WV6 379 aaPredicted RBP12.98□□□□□ -0.33
SRPRA-203ENST00000528744 RNF169Q8NCN4 708 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 HELQQ8TDG4 1101 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 NLRP7Q8WX94 980 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 MINDY3Q9H8M7 445 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 IFT122Q9HBG6 1241 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 ORC3Q9UBD5 711 aaPredicted RBP12.98□□□□□ -0.33
SRPRA-203ENST00000528744 CDH22Q9UJ99 828 aa12.98□□□□□ -0.33
SRPRA-203ENST00000528744 TRIOO75962 3097 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 JAK2O60674 1132 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 PSMC5P62195 406 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 UBE3AQ05086 875 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 COASYQ13057 564 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 PLPP4Q5VZY2 271 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 PPP4R3AQ6IN85 833 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 SYCE2Q6PIF2 218 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 NEK8Q86SG6 692 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 RHPN2Q8IUC4 686 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 RNF135Q8IUD6 432 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 THNSL1Q8IYQ7 743 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 SMRP1Q8NCR6 262 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
SRPRA-203ENST00000528744 TMEM143Q96AN5 459 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 S1PR5Q9H228 398 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 CYP26B1Q9NR63 512 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 TLR9Q9NR96 1032 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 BMP2KQ9NSY1 1161 aaPredicted RBP12.97□□□□□ -0.33
SRPRA-203ENST00000528744 PRKAG3Q9UGI9 489 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 MUTYHQ9UIF7 546 aa12.97□□□□□ -0.33
SRPRA-203ENST00000528744 STK36Q9NRP7 1315 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 RALGAPA2Q2PPJ7 1873 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 DCXO43602 365 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 CCNT1O60563 726 aaKnown RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 SLITRK3O94933 977 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 HOXA11P31270 313 aaPredicted RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 PHKA2P46019 1235 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 QARSP47897 775 aaKnown RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 CTTNQ14247 550 aaKnown RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 EPHA7Q15375 998 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 CPLX2Q6PUV4 134 aaKnown RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 FAM43BQ6ZT52 329 aaPredicted RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 SLC39A11Q8N1S5 342 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 NSUN7Q8NE18 718 aaKnown RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 BCL7CQ8WUZ0 217 aaPredicted RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 DYDC2Q96IM9 177 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 FAM20AQ96MK3 541 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 APOL5Q9BWW9 433 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 GCOM2Q9BZD3 368 aaPredicted RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.33
SRPRA-203ENST00000528744 USP15Q9Y4E8 981 aaPredicted RBP12.96□□□□□ -0.33
SRPRA-203ENST00000528744 CCDC194A0A1B0GVG4 234 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 BTBD18B2RXH4 712 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 LOC730098B7Z3J9 87 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 OFD1O75665 1012 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 EOMESO95936 686 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 P4HBP07237 508 aaKnown RBP12.95□□□□□ -0.34
SRPRA-203ENST00000528744 LAG3P18627 525 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 FOSBP53539 338 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 UBXN11Q5T124 520 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 KANK3Q6NY19 840 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 TMEM184AQ6ZMB5 413 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 FAM177A1Q8N128 213 aaPredicted RBP12.95□□□□□ -0.34
SRPRA-203ENST00000528744 AUTS2Q8WXX7 1259 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 SUSD6Q92537 303 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 NLRP4Q96MN2 994 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 SCLT1Q96NL6 688 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 TCF25Q9BQ70 676 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 VN1R3Q9BXE9 311 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 NRDE2Q9H7Z3 1164 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 XPNPEP1Q9NQW7 623 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
SRPRA-203ENST00000528744 FNDC1Q4ZHG4 1894 aaPredicted RBP12.95□□□□□ -0.34
SRPRA-203ENST00000528744 PRR33A8MZF0 331 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 SRGAP2CP0DJJ0 459 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 ALADP13716 330 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 PLA2G5P39877 138 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 BCAR1P56945 870 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 ANAPC15P60006 121 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 CYP4A11Q02928 519 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 NCAPH2Q6IBW4 605 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 LLGL2Q6P1M3 1020 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 AGMOQ6ZNB7 445 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 ZNF280BQ86YH2 543 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 C4orf19Q8IY42 314 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 MRPL43Q8N983 215 aaKnown RBP12.94□□□□□ -0.34
SRPRA-203ENST00000528744 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 CEP170P1Q96L14 293 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 ZNF558Q96NG5 402 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 TRAIPQ9BWF2 469 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 TMEM60Q9H2L4 133 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms