RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 ABI1Q8IZP0 508 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 ZNF710Q8N1W2 664 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 LPPQ93052 612 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 ZNF558Q96NG5 402 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 TCF25Q9BQ70 676 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 PHF20Q9BVI0 1012 aa17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 PUF60Q9UHX1 559 aaKnown RBP17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 ARIH1Q9Y4X5 557 aaPredicted RBP17.45■□□□□ 0.38
CLNS1A-210ENST00000528364 MAFO75444 373 aaPredicted RBP17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 CTDNEP1O95476 244 aa17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 PSMC5P62195 406 aa17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 HERC4Q5GLZ8 1057 aaPredicted RBP17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 EARS2Q5JPH6 523 aaKnown RBP17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 RHPN2Q8IUC4 686 aa17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 LRRC43Q8N309 656 aa17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 RPGRIP1Q96KN7 1286 aa17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 POP1Q99575 1024 aaKnown RBP17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 SLKQ9H2G2 1235 aaPredicted RBP17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 ENTPD7Q9NQZ7 604 aa17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 SPG21Q9NZD8 308 aa17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 WRAP73Q9P2S5 460 aaPredicted RBP17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 VAV3Q9UKW4 847 aa17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 LZTS1Q9Y250 596 aa17.44■□□□□ 0.38
CLNS1A-210ENST00000528364 CCDC194A0A1B0GVG4 234 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 FAM205CA6NFA0 338 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 MEIS3P2A8K0S8 358 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 LOC730098B7Z3J9 87 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 PFKFB2O60825 505 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 EOMESO95936 686 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 TECP42680 631 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 DNM2P50570 870 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 KCNC3Q14003 757 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 PDE12Q6L8Q7 609 aaKnown RBP17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 SYCE2Q6PIF2 218 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 PIK3AP1Q6ZUJ8 805 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 HFE2Q6ZVN8 426 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 TMC7Q7Z402 723 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 SLC39A11Q8N1S5 342 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 HAS1Q92839 578 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 S1PR5Q9H228 398 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 KCNMB3Q9NPA1 279 aa17.43■□□□□ 0.38
CLNS1A-210ENST00000528364 ZBTB39O15060 712 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 PHKA2P46019 1235 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 KRT17Q04695 432 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 ANKRD54Q6NXT1 300 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 NEK8Q86SG6 692 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 SUSD6Q92537 303 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 NLRP4Q96MN2 994 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 CDCA3Q99618 268 aaPredicted RBP17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 CYP26B1Q9NR63 512 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 CHST12Q9NRB3 414 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 BMP2KQ9NSY1 1161 aaPredicted RBP17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 DACT1Q9NYF0 836 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 CDH22Q9UJ99 828 aa17.42■□□□□ 0.38
CLNS1A-210ENST00000528364 CCNT1O60563 726 aaKnown RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 FDPSP14324 419 aaKnown RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 HOXD11P31277 338 aaPredicted RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 QARSP47897 775 aaKnown RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 BCAR1P56945 870 aa17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 CDC42EP1Q00587 391 aa17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 PPP2R5CQ13362 524 aa17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 CBX2Q14781 532 aaPredicted RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 TWF2Q6IBS0 349 aaKnown RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 TMEM184AQ6ZMB5 413 aa17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 CATSPER4Q7RTX7 472 aa17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 TMEM173Q86WV6 379 aaPredicted RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 FAM177A1Q8N128 213 aaPredicted RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 NECAB1Q8N987 351 aa17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 EDAQ92838 391 aa17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 TMEM143Q96AN5 459 aa17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 FAM20AQ96MK3 541 aa17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 PHF7Q9BWX1 381 aaPredicted RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 NGRNQ9NPE2 291 aaKnown RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 RGL1Q9NZL6 768 aa17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 PIN4Q9Y237 131 aaKnown RBP17.41■□□□□ 0.38
CLNS1A-210ENST00000528364 C2orf71A6NGG8 1288 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 CDKL5O76039 1030 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 SRGAP2CP0DJJ0 459 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 SFPQP23246 707 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 PPM1AP35813 382 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 AK2P54819 239 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 PPP4R3AQ6IN85 833 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 ZNF410Q86VK4 478 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 MRPL43Q8N983 215 aaKnown RBP17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 PRPF31Q8WWY3 499 aaKnown RBP17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 AUTS2Q8WXX7 1259 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 CEP170P1Q96L14 293 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 MINDY3Q9H8M7 445 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 IFT122Q9HBG6 1241 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 ORC3Q9UBD5 711 aaPredicted RBP17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 INPP5FQ9Y2H2 1132 aa17.4■□□□□ 0.38
CLNS1A-210ENST00000528364 ZNF318Q5VUA4 2279 aa17.39■□□□□ 0.37
CLNS1A-210ENST00000528364 MARCH6O60337 910 aa17.39■□□□□ 0.37
CLNS1A-210ENST00000528364 B4GALT3O60512 393 aa17.39■□□□□ 0.37
CLNS1A-210ENST00000528364 CLASP2O75122 1294 aaKnown RBP17.39■□□□□ 0.37
CLNS1A-210ENST00000528364 OFD1O75665 1012 aa17.39■□□□□ 0.37
CLNS1A-210ENST00000528364 LARGE1O95461 756 aa17.39■□□□□ 0.37
CLNS1A-210ENST00000528364 CXCL14O95715 111 aa17.39■□□□□ 0.37
CLNS1A-210ENST00000528364 P4HBP07237 508 aaKnown RBP17.39■□□□□ 0.37
CLNS1A-210ENST00000528364 SP100P23497 879 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms