RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 FBXL16Q8N461 479 aa17.73■□□□□ 0.43
CTTN-212ENST00000527962 ATOH1Q92858 354 aaPredicted RBP17.73■□□□□ 0.43
CTTN-212ENST00000527962 SLC5A5Q92911 643 aa17.73■□□□□ 0.43
CTTN-212ENST00000527962 PHKBQ93100 1093 aa17.73■□□□□ 0.43
CTTN-212ENST00000527962 LENG9Q96B70 501 aa17.73■□□□□ 0.43
CTTN-212ENST00000527962 JPH2Q9BR39 696 aaPredicted RBP17.73■□□□□ 0.43
CTTN-212ENST00000527962 SLC26A6Q9BXS9 759 aa17.73■□□□□ 0.43
CTTN-212ENST00000527962 RNF19AQ9NV58 838 aa17.73■□□□□ 0.43
CTTN-212ENST00000527962 DZANK1Q9NVP4 752 aa17.73■□□□□ 0.43
CTTN-212ENST00000527962 SORCS3Q9UPU3 1222 aa17.73■□□□□ 0.43
CTTN-212ENST00000527962 KIAA1671Q9BY89 1806 aa17.72■□□□□ 0.43
CTTN-212ENST00000527962 ZNF862O60290 1169 aa17.72■□□□□ 0.43
CTTN-212ENST00000527962 SP100P23497 879 aaPredicted RBP17.72■□□□□ 0.43
CTTN-212ENST00000527962 POLGP54098 1239 aaPredicted RBP17.72■□□□□ 0.43
CTTN-212ENST00000527962 BCAR1P56945 870 aa17.72■□□□□ 0.43
CTTN-212ENST00000527962 TCF15Q12870 199 aa17.72■□□□□ 0.43
CTTN-212ENST00000527962 TWF2Q6IBS0 349 aaKnown RBP17.72■□□□□ 0.43
CTTN-212ENST00000527962 ZNF598Q86UK7 904 aaKnown RBP17.72■□□□□ 0.43
CTTN-212ENST00000527962 ZNF410Q86VK4 478 aa17.72■□□□□ 0.43
CTTN-212ENST00000527962 PLCD3Q8N3E9 789 aa17.72■□□□□ 0.43
CTTN-212ENST00000527962 KREMEN2Q8NCW0 462 aa17.72■□□□□ 0.43
CTTN-212ENST00000527962 ZNF668Q96K58 619 aaPredicted RBP17.72■□□□□ 0.43
CTTN-212ENST00000527962 TRAIPQ9BWF2 469 aa17.72■□□□□ 0.43
CTTN-212ENST00000527962 NIFKQ9BYG3 293 aaKnown RBP17.72■□□□□ 0.43
CTTN-212ENST00000527962 SEPT9Q9UHD8 586 aaPredicted RBP17.72■□□□□ 0.43
CTTN-212ENST00000527962 NID2Q14112 1375 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 CLASP2O75122 1294 aaKnown RBP17.71■□□□□ 0.43
CTTN-212ENST00000527962 ZC3H11AO75152 810 aaKnown RBP eCLIP17.71■□□□□ 0.43
CTTN-212ENST00000527962 IFNAR1P17181 557 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 PHKA2P46019 1235 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 RAB27AP51159 221 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 RNASELQ05823 741 aaKnown RBP17.71■□□□□ 0.43
CTTN-212ENST00000527962 Q4G0T1 1027 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 PPFIBP1Q86W92 1011 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 EXOC8Q8IYI6 725 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 VPS52Q8N1B4 723 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 PGBD4Q96DM1 585 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 UNC45AQ9H3U1 944 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 VPS54Q9P1Q0 977 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 FNDC1Q4ZHG4 1894 aaPredicted RBP17.71■□□□□ 0.43
CTTN-212ENST00000527962 PLXNA4Q9HCM2 1894 aa17.71■□□□□ 0.43
CTTN-212ENST00000527962 LOXHD1Q8IVV2 1947 aa17.7■□□□□ 0.42
CTTN-212ENST00000527962 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.7■□□□□ 0.42
CTTN-212ENST00000527962 SPDYE4A6NLX3 237 aa17.7■□□□□ 0.42
CTTN-212ENST00000527962 DKC1O60832 514 aaKnown RBP eCLIP17.7■□□□□ 0.42
CTTN-212ENST00000527962 CPA1P15085 419 aa17.7■□□□□ 0.42
CTTN-212ENST00000527962 FGFR4P22455 802 aa17.7■□□□□ 0.42
CTTN-212ENST00000527962 TARBP2Q15633 366 aaKnown RBP17.7■□□□□ 0.42
CTTN-212ENST00000527962 MTERF2Q49AM1 385 aa17.7■□□□□ 0.42
CTTN-212ENST00000527962 DDX53Q86TM3 631 aaKnown RBP17.7■□□□□ 0.42
CTTN-212ENST00000527962 TBCKQ8TEA7 893 aa17.7■□□□□ 0.42
CTTN-212ENST00000527962 KCNB2Q92953 911 aa17.7■□□□□ 0.42
CTTN-212ENST00000527962 DBR1Q9UK59 544 aaKnown RBP17.7■□□□□ 0.42
CTTN-212ENST00000527962 PIN4Q9Y237 131 aaKnown RBP17.7■□□□□ 0.42
CTTN-212ENST00000527962 IRAK3Q9Y616 596 aa17.7■□□□□ 0.42
CTTN-212ENST00000527962 DDX11L8A8MPP1 907 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 NT5C1B-RDH14C9J2C7 533 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 RPS6KB1P23443 525 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 HSPA4P34932 840 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 VCPP55072 806 aaKnown RBP17.69■□□□□ 0.42
CTTN-212ENST00000527962 UGCGQ16739 394 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 NOMO2Q5JPE7 1267 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 GALNT17Q6IS24 598 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 CABP7Q86V35 215 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 RHPN2Q8IUC4 686 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 FAM177A1Q8N128 213 aaPredicted RBP17.69■□□□□ 0.42
CTTN-212ENST00000527962 TDRD5Q8NAT2 981 aaKnown RBP17.69■□□□□ 0.42
CTTN-212ENST00000527962 URGCPQ8TCY9 931 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 PHOX2BQ99453 314 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 POMKQ9H5K3 350 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 SUCLA2Q9P2R7 463 aaPredicted RBP17.69■□□□□ 0.42
CTTN-212ENST00000527962 PCDHA4Q9UN74 947 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 USTQ9Y2C2 406 aa17.69■□□□□ 0.42
CTTN-212ENST00000527962 CYP3A7-CYP3A51PA0A087WV96 503 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 A0A087WZ62 844 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 C2CD4DB7Z1M9 353 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 CPLX1O14810 134 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 ADAMTS3O15072 1205 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 GFRA3O60609 400 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 MAFO75444 373 aaPredicted RBP17.68■□□□□ 0.42
CTTN-212ENST00000527962 CSDE1O75534 798 aaKnown RBP17.68■□□□□ 0.42
CTTN-212ENST00000527962 PSMD10O75832 226 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 REC8O95072 547 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 CTSAP10619 480 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 CYP3A7P24462 503 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 SSRP1Q08945 709 aaKnown RBP17.68■□□□□ 0.42
CTTN-212ENST00000527962 NTRK3Q16288 839 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 RARS2Q5T160 578 aaKnown RBP17.68■□□□□ 0.42
CTTN-212ENST00000527962 CPLX2Q6PUV4 134 aaKnown RBP17.68■□□□□ 0.42
CTTN-212ENST00000527962 CATSPER4Q7RTX7 472 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 ZDHHC14Q8IZN3 488 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 EVPLQ92817 2033 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 ACSF2Q96CM8 615 aaPredicted RBP17.68■□□□□ 0.42
CTTN-212ENST00000527962 IGSF21Q96ID5 467 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 FDXACB1Q9BRP7 624 aaPredicted RBP17.68■□□□□ 0.42
CTTN-212ENST00000527962 EMILIN2Q9BXX0 1053 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 AGXT2Q9BYV1 514 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 MFSD1Q9H3U5 465 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 SNX14Q9Y5W7 946 aa17.68■□□□□ 0.42
CTTN-212ENST00000527962 ZFHX2Q9C0A1 2572 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms