RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TCF20Q9UGU0 1960 aaKnown RBP15.88■□□□□ 0.13
CAPN1-212ENST00000527887 GPR37L1O60883 481 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 EYA4O95677 639 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 COL9A1P20849 921 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 SSTR3P32745 418 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-212ENST00000527887 SMAD4Q13485 552 aaKnown RBP15.88■□□□□ 0.13
CAPN1-212ENST00000527887 SMAD2Q15796 467 aaKnown RBP15.88■□□□□ 0.13
CAPN1-212ENST00000527887 RHPN2Q8IUC4 686 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 ADHFE1Q8IWW8 467 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 TCP11Q8WWU5 503 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 PSPC1Q8WXF1 523 aaKnown RBP15.88■□□□□ 0.13
CAPN1-212ENST00000527887 MRPS27Q92552 414 aaKnown RBP15.88■□□□□ 0.13
CAPN1-212ENST00000527887 ZNF558Q96NG5 402 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 TLE6Q9H808 572 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 NGRNQ9NPE2 291 aaKnown RBP15.88■□□□□ 0.13
CAPN1-212ENST00000527887 RNF19AQ9NV58 838 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 CD207Q9UJ71 328 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 PCDHA12Q9UN75 941 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 NLRC5Q86WI3 1866 aa15.88■□□□□ 0.13
CAPN1-212ENST00000527887 TMEM150BA6NC51 233 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 C19orf67A6NJJ6 358 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 MBTPS2O43462 519 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 ZNF623O75123 536 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 YWHABP31946 246 aaKnown RBP15.87■□□□□ 0.13
CAPN1-212ENST00000527887 IRS1P35568 1242 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 PHKA2P46019 1235 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 NDUFV1P49821 464 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 RAB27AP51159 221 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 POLGP54098 1239 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-212ENST00000527887 NR5A1Q13285 461 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 PCBP1Q15365 356 aaKnown RBP eCLIP15.87■□□□□ 0.13
CAPN1-212ENST00000527887 EARS2Q5JPH6 523 aaKnown RBP15.87■□□□□ 0.13
CAPN1-212ENST00000527887 KCNT2Q6UVM3 1135 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 LRRC55Q6ZSA7 311 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 SRGAP1Q7Z6B7 1085 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 ZNF668Q96K58 619 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-212ENST00000527887 MSLNLQ96KJ4 702 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 SH2D3AQ9BRG2 576 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 LXNQ9BS40 222 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 EPHX3Q9H6B9 360 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 CD320Q9NPF0 282 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 LIMCH1Q9UPQ0 1083 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 COL4A3BPQ9Y5P4 624 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 EVPLQ92817 2033 aa15.87■□□□□ 0.13
CAPN1-212ENST00000527887 FSCN2O14926 492 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 LYPLA2O95372 231 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 SRGAP2BP0DMP2 458 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 FGFR4P22455 802 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 GTF2F1P35269 517 aaKnown RBP eCLIP15.86■□□□□ 0.13
CAPN1-212ENST00000527887 NRIP1P48552 1158 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 NPEPPSP55786 919 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 ZP2Q05996 745 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 DLX2Q07687 328 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-212ENST00000527887 SPIRE1Q08AE8 756 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 COASYQ13057 564 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 BMS1Q14692 1282 aaKnown RBP15.86■□□□□ 0.13
CAPN1-212ENST00000527887 SAFBQ15424 915 aaKnown RBP eCLIP15.86■□□□□ 0.13
CAPN1-212ENST00000527887 TMEM31Q5JXX7 168 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 PLA2G4FQ68DD2 849 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 TWF2Q6IBS0 349 aaKnown RBP15.86■□□□□ 0.13
CAPN1-212ENST00000527887 NCAPH2Q6IBW4 605 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 CATSPER4Q7RTX7 472 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 DIS3L2Q8IYB7 885 aaKnown RBP15.86■□□□□ 0.13
CAPN1-212ENST00000527887 PGBD4Q96DM1 585 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 NLRP4Q96MN2 994 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 LLPHQ9BRT6 129 aaKnown RBP15.86■□□□□ 0.13
CAPN1-212ENST00000527887 SPG21Q9NZD8 308 aa15.86■□□□□ 0.13
CAPN1-212ENST00000527887 BTBD18B2RXH4 712 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 TBX10O75333 385 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 SLITRK3O94933 977 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 LARGE1O95461 756 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 XRCC6P12956 609 aaKnown RBP eCLIP15.85■□□□□ 0.13
CAPN1-212ENST00000527887 ALDH7A1P49419 539 aaKnown RBP15.85■□□□□ 0.13
CAPN1-212ENST00000527887 POU5F1BQ06416 359 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 MXD4Q14582 209 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-212ENST00000527887 CALCRLQ16602 461 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 DUSP6Q16828 381 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 CLLU1OSQ5K130 101 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 ADGRD2Q7Z7M1 963 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 RNF169Q8NCN4 708 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 PRPF31Q8WWY3 499 aaKnown RBP15.85■□□□□ 0.13
CAPN1-212ENST00000527887 DYDC2Q96IM9 177 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 HSD17B14Q9BPX1 270 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 IFT122Q9HBG6 1241 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 ANKEF1Q9NU02 776 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 RGL1Q9NZL6 768 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 WRAP73Q9P2S5 460 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-212ENST00000527887 STK39Q9UEW8 545 aa15.85■□□□□ 0.13
CAPN1-212ENST00000527887 PIN4Q9Y237 131 aaKnown RBP15.85■□□□□ 0.13
CAPN1-212ENST00000527887 RBM19Q9Y4C8 960 aaKnown RBP15.85■□□□□ 0.13
CAPN1-212ENST00000527887 ARIH1Q9Y4X5 557 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-212ENST00000527887 MYO7AQ13402 2215 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 LINC01565O15544 149 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 NEMFO60524 1076 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 CSDE1O75534 798 aaKnown RBP15.84■□□□□ 0.13
CAPN1-212ENST00000527887 CSPG5O95196 566 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 ATF7P17544 494 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-212ENST00000527887 ERVFC1P60507 584 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 LAMTOR4Q0VGL1 99 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms