RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 GTF2BQ00403 316 aa16.7■□□□□ 0.26
USH1C-207ENST00000527720 KRT76Q01546 638 aa16.7■□□□□ 0.26
USH1C-207ENST00000527720 CETN1Q12798 172 aa16.7■□□□□ 0.26
USH1C-207ENST00000527720 SF3B2Q13435 895 aaKnown RBP16.7■□□□□ 0.26
USH1C-207ENST00000527720 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
USH1C-207ENST00000527720 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
USH1C-207ENST00000527720 RDM1Q8NG50 284 aa16.7■□□□□ 0.26
USH1C-207ENST00000527720 TAAR1Q96RJ0 339 aa16.7■□□□□ 0.26
USH1C-207ENST00000527720 SYT11Q9BT88 431 aa16.7■□□□□ 0.26
USH1C-207ENST00000527720 PKD2L1Q9P0L9 805 aa16.7■□□□□ 0.26
USH1C-207ENST00000527720 TMEM59LQ9UK28 342 aa16.7■□□□□ 0.26
USH1C-207ENST00000527720 ARID2Q68CP9 1835 aa16.7■□□□□ 0.26
USH1C-207ENST00000527720 PHIPQ8WWQ0 1821 aa16.69■□□□□ 0.26
USH1C-207ENST00000527720 MCCD1P59942 119 aaPredicted RBP16.69■□□□□ 0.26
USH1C-207ENST00000527720 PSMC5P62195 406 aa16.69■□□□□ 0.26
USH1C-207ENST00000527720 TNNC1P63316 161 aa16.69■□□□□ 0.26
USH1C-207ENST00000527720 GSPT2Q8IYD1 628 aaKnown RBP16.69■□□□□ 0.26
USH1C-207ENST00000527720 ACTRT1Q8TDG2 376 aa16.69■□□□□ 0.26
USH1C-207ENST00000527720 CCDC43Q96MW1 224 aaKnown RBP16.69■□□□□ 0.26
USH1C-207ENST00000527720 PDCD2LQ9BRP1 358 aa16.69■□□□□ 0.26
USH1C-207ENST00000527720 GPR88Q9GZN0 384 aa16.69■□□□□ 0.26
USH1C-207ENST00000527720 GDF3Q9NR23 364 aa16.69■□□□□ 0.26
USH1C-207ENST00000527720 ANKEF1Q9NU02 776 aa16.69■□□□□ 0.26
USH1C-207ENST00000527720 RGS17Q9UGC6 210 aaPredicted RBP16.69■□□□□ 0.26
USH1C-207ENST00000527720 NCANO14594 1321 aa16.69■□□□□ 0.26
USH1C-207ENST00000527720 ASTN2O75129 1339 aaPredicted RBP16.69■□□□□ 0.26
USH1C-207ENST00000527720 WDR64B1ANS9 1081 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 TRIM49P0CI25 452 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 TRIM49CP0CI26 452 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 GYS2P54840 703 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 SLC7A5Q01650 507 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 POTEAQ6S8J7 498 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 RNF207Q6ZRF8 634 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 LNX1Q8TBB1 728 aaPredicted RBP16.68■□□□□ 0.26
USH1C-207ENST00000527720 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
USH1C-207ENST00000527720 PXMP2Q9NR77 195 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 SUCLA2Q9P2R7 463 aaPredicted RBP16.68■□□□□ 0.26
USH1C-207ENST00000527720 TCEAL9Q9UHQ7 104 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 PMM2O15305 246 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 RNF40O75150 1001 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 TMEM253P0C7T8 217 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
USH1C-207ENST00000527720 KIF22Q14807 665 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 SND1Q7KZF4 910 aaKnown RBP eCLIP16.68■□□□□ 0.26
USH1C-207ENST00000527720 OLIG1Q8TAK6 271 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 LMO3Q8TAP4 145 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 CALR3Q96L12 384 aaKnown RBP16.68■□□□□ 0.26
USH1C-207ENST00000527720 TRERF1Q96PN7 1200 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 RMDN3Q96TC7 470 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
USH1C-207ENST00000527720 HOMER2Q9NSB8 354 aa16.68■□□□□ 0.26
USH1C-207ENST00000527720 PACSIN2Q9UNF0 486 aaPredicted RBP16.68■□□□□ 0.26
USH1C-207ENST00000527720 GOLGB1Q14789 3259 aaKnown RBP16.68■□□□□ 0.26
USH1C-207ENST00000527720 GOLGA6BA6NDN3 693 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 ERICH4A6NGS2 130 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 KCNK3O14649 394 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 VAMP7P51809 220 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 NCKAP1LP55160 1127 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 MTMR2Q13614 643 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 DCAF15Q66K64 600 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 GOLGA6L1Q8N7Z2 621 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 XXYLT1Q8NBI6 393 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.67■□□□□ 0.26
USH1C-207ENST00000527720 HVCN1Q96D96 273 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 CALCOCO1Q9P1Z2 691 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 USP20Q9Y2K6 914 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 VWA5AO00534 786 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 MAFGO15525 162 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 GALCP54803 685 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 ALS2CLQ60I27 953 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 PEX26Q7Z412 305 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 HAUS6Q7Z4H7 955 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 EIF1ADQ8N9N8 165 aaKnown RBP16.67■□□□□ 0.26
USH1C-207ENST00000527720 SENP7Q9BQF6 1050 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 AS3MTQ9HBK9 375 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 STXBP5LQ9Y2K9 1186 aa16.67■□□□□ 0.26
USH1C-207ENST00000527720 ZBTB48P10074 688 aaPredicted RBP16.66■□□□□ 0.26
USH1C-207ENST00000527720 GGCXP38435 758 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 LMAN1P49257 510 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 OAZ1P54368 228 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 SPP2Q13103 211 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 PAK2Q13177 524 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 ARHGEF16Q5VV41 709 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 MAEAQ7L5Y9 396 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 SCFD2Q8WU76 684 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 RFFLQ8WZ73 363 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 GPRASP2Q96D09 838 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 EXOC7Q9UPT5 735 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 EMSYQ7Z589 1322 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 AGPSO00116 658 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 HEXIM1O94992 359 aaKnown RBP16.66■□□□□ 0.26
USH1C-207ENST00000527720 MYCLP12524 364 aaPredicted RBP16.66■□□□□ 0.26
USH1C-207ENST00000527720 DNA2P51530 1060 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 PLS1Q14651 629 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 PHLDB3Q6NSJ2 640 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 ZNF746Q6NUN9 644 aaPredicted RBP16.66■□□□□ 0.26
USH1C-207ENST00000527720 GLYCTKQ8IVS8 523 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 GDAP1L1Q96MZ0 367 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 MAF1Q9H063 256 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 FAM204AQ9H8W3 233 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms