RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 NT5DC3Q86UY8 548 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 PARP9Q8IXQ6 854 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 TRPM4Q8TD43 1214 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 FAM163AQ96GL9 167 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-208ENST00000527323 MYOZ2Q9NPC6 264 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 F8VZ95 297 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 DDX3XO00571 662 aaKnown RBP eCLIP13.55□□□□□ -0.242e-15■■■■□ 22.6
CAPN1-208ENST00000527323 RPL13P26373 211 aaKnown RBP13.55□□□□□ -0.24
CAPN1-208ENST00000527323 CASP4P49662 377 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 PSMC6P62333 389 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 ZNF543Q08ER8 600 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 SPRED3Q2MJR0 410 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 CERKLQ49MI3 558 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-208ENST00000527323 ANKRD20A8PQ5CZ79 823 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 HYIQ5T013 277 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 CYB5D1Q6P9G0 228 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 C3orf20Q8ND61 904 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 OSGEPQ9NPF4 335 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 SWAP70Q9UH65 585 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 PNMA2Q9UL42 364 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 LRRC37AA6NMS7 1700 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 GCNT3O95395 438 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 HLA-DOAP06340 250 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 STAT1P42224 750 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 PRR16Q569H4 304 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 ACER1Q8TDN7 264 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 RAB17Q9H0T7 212 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 AJAP1Q9UKB5 411 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-208ENST00000527323 SPDYE3A6NKU9 549 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 ZBTB5O15062 677 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 BUB1BO60566 1050 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-208ENST00000527323 TTLL1O95922 423 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 NR3C1P04150 777 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 NF2P35240 595 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 SCTRP47872 440 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 GIT2Q14161 759 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 RASA3Q14644 834 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 GPR162Q16538 588 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 FUKQ8N0W3 1084 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 HVCN1Q96D96 273 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.55□□□□□ -0.24
CAPN1-208ENST00000527323 LRRC4CQ9HCJ2 640 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-208ENST00000527323 NR2E1Q9Y466 385 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 DAAM1Q9Y4D1 1078 aa13.55□□□□□ -0.24
CAPN1-208ENST00000527323 GOLGA6L10A0A0M3HER8 536 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 CAND2O75155 1236 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 EEF2P13639 858 aaKnown RBP13.54□□□□□ -0.24
CAPN1-208ENST00000527323 FERP16591 822 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 PRKCIP41743 596 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 SLC12A3P55017 1021 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 PLTPP55058 493 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 ZNF211Q13398 564 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-208ENST00000527323 NEDD9Q14511 834 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 E2F5Q15329 346 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 EPHA7Q15375 998 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 PPP1R18Q6NYC8 613 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 ARMC9Q7Z3E5 817 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 HOOK3Q86VS8 718 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 CATSPER3Q86XQ3 398 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 GLYCTKQ8IVS8 523 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 RASGEF1CQ8N431 466 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 ERMNQ8TAM6 284 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 UHMK1Q8TAS1 419 aaKnown RBP13.54□□□□□ -0.24
CAPN1-208ENST00000527323 SLC35G2Q8TBE7 412 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 CTNNBL1Q8WYA6 563 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-208ENST00000527323 CHMP6Q96FZ7 201 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
CAPN1-208ENST00000527323 REEP2Q9BRK0 252 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 METTL14Q9HCE5 456 aaKnown RBP13.54□□□□□ -0.24
CAPN1-208ENST00000527323 A1CFQ9NQ94 594 aaKnown RBP13.54□□□□□ -0.24
CAPN1-208ENST00000527323 TRAF3IP3Q9Y228 551 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 SFI1A8K8P3 1242 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 KRT13P13646 458 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 CLK2P49760 499 aaKnown RBP13.54□□□□□ -0.24
CAPN1-208ENST00000527323 DR1Q01658 176 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 GLG1Q92896 1179 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 TATDN2Q93075 761 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 XPO6Q96QU8 1125 aaKnown RBP13.54□□□□□ -0.24
CAPN1-208ENST00000527323 CNOT10Q9H9A5 744 aaKnown RBP13.54□□□□□ -0.24
CAPN1-208ENST00000527323 STXBP5LQ9Y2K9 1186 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 SNX24Q9Y343 169 aa13.54□□□□□ -0.24
CAPN1-208ENST00000527323 TBCAO75347 108 aaKnown RBP13.53□□□□□ -0.24
CAPN1-208ENST00000527323 EIF3BP55884 814 aaKnown RBP13.53□□□□□ -0.24
CAPN1-208ENST00000527323 CC2D2BQ6DHV5 1058 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 SLFN11Q7Z7L1 901 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 SGSM3Q96HU1 749 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 GMLQ99445 158 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 PITPNM2Q9BZ72 1349 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 CCDC113Q9H0I3 377 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 TMOD2Q9NZR1 351 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 SERPINA10Q9UK55 444 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 ODF2LQ9ULJ1 636 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 PPP1R9AQ9ULJ8 1098 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 PCDHA1Q9Y5I3 950 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 CD2APQ9Y5K6 639 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 RSPH10B2B2RC85 870 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 PDXKO00764 312 aa13.53□□□□□ -0.24
CAPN1-208ENST00000527323 EVI5O60447 810 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms