RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 USO1O60763 962 aaKnown RBP12.47□□□□□ -0.41
CTSB-214ENST00000527243 DGKIO75912 1065 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 CYP11B2P19099 503 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 FGFR4P22455 802 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 GLRA2P23416 452 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 ERVK-21P61565 698 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 GRIN1Q05586 938 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 GSE1Q14687 1217 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 TMEM119Q4V9L6 283 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 SLC24A5Q71RS6 500 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 SRGAP1Q7Z6B7 1085 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 KCTD17Q8N5Z5 321 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 MYLIPQ8WY64 445 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 NLRP4Q96MN2 994 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 PNMA5Q96PV4 448 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 TRAIPQ9BWF2 469 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 PRDM12Q9H4Q4 367 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 ZSCAN16Q9H4T2 348 aaPredicted RBP12.47□□□□□ -0.41
CTSB-214ENST00000527243 C1orf112Q9NSG2 853 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 DDX19AQ9NUU7 478 aaKnown RBP12.47□□□□□ -0.41
CTSB-214ENST00000527243 KIAA1024Q9UPX6 916 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 CLIC4Q9Y696 253 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 COL6A3P12111 3177 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 TRANK1O15050 2925 aa12.47□□□□□ -0.41
CTSB-214ENST00000527243 SLC26A4O43511 780 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 UPP2O95045 317 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 EYA4O95677 639 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 PDIA4P13667 645 aaKnown RBP12.46□□□□□ -0.41
CTSB-214ENST00000527243 MCM4P33991 863 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 PTENP60484 403 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 GRB10Q13322 594 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 CAPSQ13938 189 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 MXD4Q14582 209 aaPredicted RBP12.46□□□□□ -0.41
CTSB-214ENST00000527243 AMHR2Q16671 573 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 KRT79Q5XKE5 535 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 PADI6Q6TGC4 694 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 ZNF598Q86UK7 904 aaKnown RBP12.46□□□□□ -0.41
CTSB-214ENST00000527243 MCPH1Q8NEM0 835 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 LRRC15Q8TF66 581 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 AK8Q96MA6 479 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 SCLT1Q96NL6 688 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 USP28Q96RU2 1077 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 YME1L1Q96TA2 773 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 NFKBIZQ9BYH8 718 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 INO80BQ9C086 356 aaPredicted RBP12.46□□□□□ -0.41
CTSB-214ENST00000527243 POLR3FQ9H1D9 316 aaPredicted RBP12.46□□□□□ -0.41
CTSB-214ENST00000527243 BHMT2Q9H2M3 363 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 ELAC1Q9H777 363 aaKnown RBP12.46□□□□□ -0.41
CTSB-214ENST00000527243 GPRC5CQ9NQ84 441 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 CHST12Q9NRB3 414 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 RNF19AQ9NV58 838 aa12.46□□□□□ -0.41
CTSB-214ENST00000527243 ADGRA3Q8IWK6 1321 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 DENND3A2RUS2 1198 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 ARHGEF35A5YM69 484 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 E9PMD0 336 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 LPXNO60711 386 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 STAG3L1P0CL83 205 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 SRGAP2CP0DJJ0 459 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 ATF7P17544 494 aaPredicted RBP12.45□□□□□ -0.42
CTSB-214ENST00000527243 POU3F3P20264 500 aaPredicted RBP12.45□□□□□ -0.42
CTSB-214ENST00000527243 SFPQP23246 707 aaKnown RBP eCLIP12.45□□□□□ -0.42
CTSB-214ENST00000527243 HOXA11P31270 313 aaPredicted RBP12.45□□□□□ -0.42
CTSB-214ENST00000527243 LONP1P36776 959 aaKnown RBP12.45□□□□□ -0.42
CTSB-214ENST00000527243 NASPP49321 788 aaPredicted RBP12.45□□□□□ -0.42
CTSB-214ENST00000527243 DAW1Q8N136 415 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 RNF149Q8NC42 400 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 BSNDQ8WZ55 320 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 CLP1Q92989 425 aaKnown RBP12.45□□□□□ -0.42
CTSB-214ENST00000527243 TGS1Q96RS0 853 aaKnown RBP12.45□□□□□ -0.42
CTSB-214ENST00000527243 AGPAT5Q9NUQ2 364 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 TMEM161AQ9NX61 479 aa12.45□□□□□ -0.42
CTSB-214ENST00000527243 FBXO2Q9UK22 296 aaPredicted RBP12.45□□□□□ -0.42
CTSB-214ENST00000527243 A0A0U1RQF3 1178 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 RFXAPO00287 272 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 ZSCAN22P10073 491 aaPredicted RBP12.44□□□□□ -0.42
CTSB-214ENST00000527243 PHKA2P46019 1235 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 GATMP50440 423 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 MBTD1Q05BQ5 628 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 MAPK7Q13164 816 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 PKP1Q13835 747 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 SLC39A14Q15043 492 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 PCBP1Q15365 356 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTSB-214ENST00000527243 SKOR2Q2VWA4 1001 aaPredicted RBP12.44□□□□□ -0.42
CTSB-214ENST00000527243 CDCA2Q69YH5 1023 aaPredicted RBP12.44□□□□□ -0.42
CTSB-214ENST00000527243 C1orf186Q6ZWK4 172 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 ECHDC2Q86YB7 292 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 CMTR2Q8IYT2 770 aaKnown RBP12.44□□□□□ -0.42
CTSB-214ENST00000527243 CCDC43Q96MW1 224 aaKnown RBP12.44□□□□□ -0.42
CTSB-214ENST00000527243 C17orf80Q9BSJ5 609 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 RUSC1Q9BVN2 902 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 CERS4Q9HA82 394 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 DNM3Q9UQ16 869 aa12.44□□□□□ -0.42
CTSB-214ENST00000527243 SRPRBQ9Y5M8 271 aaKnown RBP12.44□□□□□ -0.42
CTSB-214ENST00000527243 C5orf67F2Z3F1 127 aa12.43□□□□□ -0.42
CTSB-214ENST00000527243 ZNF623O75123 536 aa12.43□□□□□ -0.42
CTSB-214ENST00000527243 FOSL2P15408 326 aa12.43□□□□□ -0.42
CTSB-214ENST00000527243 ZSCAN20P17040 1043 aaPredicted RBP12.43□□□□□ -0.42
CTSB-214ENST00000527243 MARCKSP29966 332 aaPredicted RBP12.43□□□□□ -0.42
CTSB-214ENST00000527243 SLC12A3P55017 1021 aa12.43□□□□□ -0.42
CTSB-214ENST00000527243 TFDP1Q14186 410 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms