RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 CYP2C18P33260 490 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 CCDC65Q8IXS2 484 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 CCDC155Q8N6L0 562 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 RNF149Q8NC42 400 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 NLRP7Q8WX94 980 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 CCDC34Q96HJ3 373 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 IFT74Q96LB3 600 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 OSMRQ99650 979 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 FDXACB1Q9BRP7 624 aaPredicted RBP15.17■□□□□ 0.02
CD44-224ENST00000526669 HTATIP2Q9BUP3 242 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 NOC4LQ9BVI4 516 aaKnown RBP15.17■□□□□ 0.02
CD44-224ENST00000526669 PARVGQ9HBI0 331 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 TBX21Q9UL17 535 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 TRPV2Q9Y5S1 764 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 TRIM43BA6NCK2 446 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 M0QZ92 97 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 GPR32O75388 356 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 CSDE1O75534 798 aaKnown RBP15.16■□□□□ 0.02
CD44-224ENST00000526669 RPN1P04843 607 aaKnown RBP15.16■□□□□ 0.02
CD44-224ENST00000526669 NMT1P30419 496 aaKnown RBP15.16■□□□□ 0.02
CD44-224ENST00000526669 CCL23P55773 120 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 MGAT3Q09327 533 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 BFSP2Q13515 415 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 KMT5BQ4FZB7 885 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 ODR4Q5SWX8 454 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 CAVIN1Q6NZI2 390 aaKnown RBP15.16■□□□□ 0.02
CD44-224ENST00000526669 UNC13DQ70J99 1090 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 CAGE1Q8TC20 777 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 DPF3Q92784 378 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 TRIM43Q96BQ3 446 aaPredicted RBP15.16■□□□□ 0.02
CD44-224ENST00000526669 SCLYQ96I15 445 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 OSBPL7Q9BZF2 842 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 HIPK3Q9H422 1215 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 TMEM63CQ9P1W3 806 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 HOOK1Q9UJC3 728 aaKnown RBP15.16■□□□□ 0.02
CD44-224ENST00000526669 ANK1P16157 1881 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 ADGRA3Q8IWK6 1321 aa15.16■□□□□ 0.02
CD44-224ENST00000526669 FRMD3A2A2Y4 597 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 K7ENM7 598 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 SLC16A4O15374 487 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 CHRNA1P02708 482 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 PLS3P13797 630 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 FGFR4P22455 802 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 NPTX2P47972 431 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 ZNF131P52739 623 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 DMP1Q13316 513 aaPredicted RBP15.15■□□□□ 0.02
CD44-224ENST00000526669 TFDP1Q14186 410 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 MXD4Q14582 209 aaPredicted RBP15.15■□□□□ 0.02
CD44-224ENST00000526669 HERC4Q5GLZ8 1057 aaPredicted RBP15.15■□□□□ 0.02
CD44-224ENST00000526669 ISM2Q6H9L7 571 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 CNNM4Q6P4Q7 775 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 NME8Q8N427 588 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 SMARCE1Q969G3 411 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 FGFBP2Q9BYJ0 223 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 CELF4Q9BZC1 486 aaKnown RBP15.15■□□□□ 0.02
CD44-224ENST00000526669 WNT8AQ9H1J5 351 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 ADAMTS10Q9H324 1103 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 KMT5AQ9NQR1 393 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 EXOC1Q9NV70 894 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 ZMYND8Q9ULU4 1186 aaPredicted RBP15.15■□□□□ 0.02
CD44-224ENST00000526669 PCDHA5Q9Y5H7 936 aa15.15■□□□□ 0.02
CD44-224ENST00000526669 BIN1O00499 593 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 ASAP2O43150 1006 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 EVI5O60447 810 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 GHRP10912 638 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 SELPP16109 830 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 SYN1P17600 705 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 GAP43P17677 238 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 ITGB8P26012 769 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 NAMPTP43490 491 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 PPP2R5AQ15172 486 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 CCDC183Q5T5S1 534 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 TRAF7Q6Q0C0 670 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 LRRC8DQ7L1W4 858 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 RPAINQ86UA6 219 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 FAM178BQ8IXR5 827 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 GLIS3Q8NEA6 775 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 DEPTORQ8TB45 409 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 TMEM40Q8WWA1 233 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 MINDY3Q9H8M7 445 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 LARSQ9P2J5 1176 aaKnown RBP15.14■□□□□ 0.01
CD44-224ENST00000526669 GBF1Q92538 1859 aa15.14■□□□□ 0.01
CD44-224ENST00000526669 PVALEFA0A1B0GWK0 134 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 TRAK2O60296 914 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 SMC2O95347 1197 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 MYL1P05976 194 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 MYBP10242 640 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 RAG1P15918 1043 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 PHKA2P46019 1235 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 CASP5P51878 434 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 NCKAP1LP55160 1127 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 PTENP60484 403 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 RBL2Q08999 1139 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 PDCD11Q14690 1871 aaKnown RBP15.13■□□□□ 0.01
CD44-224ENST00000526669 MBTPS1Q14703 1052 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 KLHL40Q2TBA0 621 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 FAM26FQ5R3K3 315 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 ZNF410Q86VK4 478 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 ZBTB8OSQ8IWT0 167 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 CCDC47Q96A33 483 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms