RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 COL18A1P39060 1754 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 SH3D21A4FU49 640 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 B4E1Z4 1266 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 ASLP04424 464 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 AMY2AP04746 511 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 FAHP16930 419 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 KRT15P19012 456 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 AMY2BP19961 511 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 JAM2P57087 298 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 SMAD4Q13485 552 aaKnown RBP5.78□□□□□ -1.48
USP48-211ENST00000526044 VWA3BQ502W6 1294 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 SULT6B1Q6IMI4 303 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 TOM1L2Q6ZVM7 507 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 STK32CQ86UX6 486 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 JAZF1Q86VZ6 243 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 PTRH1Q86Y79 214 aaKnown RBP5.78□□□□□ -1.48
USP48-211ENST00000526044 ZNF526Q8TF50 670 aaPredicted RBP5.78□□□□□ -1.48
USP48-211ENST00000526044 ABCA3Q99758 1704 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 SPATA6Q9NWH7 488 aaPredicted RBP5.78□□□□□ -1.48
USP48-211ENST00000526044 COQ6Q9Y2Z9 468 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 ATP23Q9Y6H3 246 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 RTL1A6NKG5 1358 aa5.78□□□□□ -1.48
USP48-211ENST00000526044 COL14A1Q05707 1796 aaKnown RBP5.78□□□□□ -1.48
USP48-211ENST00000526044 CDK12Q9NYV4 1490 aaPredicted RBP5.77□□□□□ -1.49
USP48-211ENST00000526044 PEAK1Q9H792 1746 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 BLMP54132 1417 aaPredicted RBP5.77□□□□□ -1.49
USP48-211ENST00000526044 SMG6Q86US8 1419 aaKnown RBP5.77□□□□□ -1.49
USP48-211ENST00000526044 ZNF561-AS1K7EIQ3 104 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 MAN2B1O00754 1011 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 CELA3BP08861 270 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 HMOX1P09601 288 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 IGFALSP35858 605 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 PABPC4Q13310 644 aaKnown RBP eCLIP5.77□□□□□ -1.49
USP48-211ENST00000526044 FIGNQ5HY92 759 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 BTBD8Q5XKL5 378 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 DDX53Q86TM3 631 aaKnown RBP5.77□□□□□ -1.49
USP48-211ENST00000526044 UNC5CLQ8IV45 518 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 IGSF22Q8N9C0 903 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 TP53I13Q8NBR0 393 aaPredicted RBP5.77□□□□□ -1.49
USP48-211ENST00000526044 TMEM209Q96SK2 561 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 NTMQ9P121 344 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 CAMTA1Q9Y6Y1 1673 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 ADAMTS20P59510 1910 aa5.77□□□□□ -1.49
USP48-211ENST00000526044 WDR17Q8IZU2 1322 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 RGPD2P0DJD1 1756 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 ACOT7O00154 380 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 OPA1O60313 960 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 CDC45O75419 566 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 DNAJC8O75937 253 aaPredicted RBP5.76□□□□□ -1.49
USP48-211ENST00000526044 PTPN1P18031 435 aaKnown RBP5.76□□□□□ -1.49
USP48-211ENST00000526044 GJA4P35212 333 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 THBS2P35442 1172 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 DLX2Q07687 328 aaPredicted RBP5.76□□□□□ -1.49
USP48-211ENST00000526044 ADAM9Q13443 819 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 VASNQ6EMK4 673 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 ABHD17CQ6PCB6 329 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 HHIPL2Q6UWX4 724 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 LIPIQ6XZB0 460 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 OVCH1Q7RTY7 1134 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 ADGRG2Q8IZP9 1017 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 CISD2Q8N5K1 135 aaKnown RBP5.76□□□□□ -1.49
USP48-211ENST00000526044 CLIC6Q96NY7 704 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 SMURF1Q9HCE7 757 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 RIC8BQ9NVN3 520 aa5.76□□□□□ -1.49
USP48-211ENST00000526044 TNPO3Q9Y5L0 923 aaKnown RBP5.76□□□□□ -1.49
USP48-211ENST00000526044 AFF2P51816 1311 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 ABCC6O95255 1503 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 TLDC2A0PJX2 215 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 FAM90A27PA6NNH2 459 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 TRIM13O60858 407 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 CLASP2O75122 1294 aaKnown RBP5.75□□□□□ -1.49
USP48-211ENST00000526044 CYP7B1O75881 506 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 ENO2P09104 434 aaPredicted RBP5.75□□□□□ -1.49
USP48-211ENST00000526044 RPL13P26373 211 aaKnown RBP5.75□□□□□ -1.49
USP48-211ENST00000526044 FLT3P36888 993 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 SARSP49591 514 aaKnown RBP5.75□□□□□ -1.49
USP48-211ENST00000526044 VPS72Q15906 364 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 TMEM177Q53S58 311 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 ZCCHC8Q6NZY4 707 aaKnown RBP5.75□□□□□ -1.49
USP48-211ENST00000526044 TMC5Q6UXY8 1006 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 PROSER1Q86XN7 944 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 SP8Q8IXZ3 490 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 CCDC146Q8IYE0 955 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 CARFQ8N187 725 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 C2orf69Q8N8R5 385 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 RAPGEF4Q8WZA2 1011 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 RUNDC1Q96C34 613 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 WRNIP1Q96S55 665 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 LUC7LQ9NQ29 371 aaKnown RBP5.75□□□□□ -1.49
USP48-211ENST00000526044 INTS7Q9NVH2 962 aaKnown RBP5.75□□□□□ -1.49
USP48-211ENST00000526044 SAMD15Q9P1V8 674 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 MAGEC2Q9UBF1 373 aaPredicted RBP5.75□□□□□ -1.49
USP48-211ENST00000526044 TRPC5Q9UL62 973 aaPredicted RBP5.75□□□□□ -1.49
USP48-211ENST00000526044 WASF3Q9UPY6 502 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 THRAP3Q9Y2W1 955 aaKnown RBP5.75□□□□□ -1.49
USP48-211ENST00000526044 CD2APQ9Y5K6 639 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 LMO7Q8WWI1 1683 aa5.75□□□□□ -1.49
USP48-211ENST00000526044 IGSF1Q8N6C5 1336 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 MAPK8IP3Q9UPT6 1336 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 LRP6O75581 1613 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms