RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 DUPD1Q68J44 220 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 PPP1R21Q6ZMI0 780 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 EXOC3L1Q86VI1 746 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 ECHDC2Q86YB7 292 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 KSR1Q8IVT5 923 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 NBPF15Q8N660 670 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 SUPT20HQ8NEM7 779 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 ATP8B4Q8TF62 1192 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 DCAF5Q96JK2 942 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 ZNF512BQ96KM6 892 aaPredicted RBP5.07□□□□□ -1.6
HIPK3-204ENST00000525975 TBC1D10AQ9BXI6 508 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 GREM2Q9H772 168 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 ZWILCHQ9H900 591 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 DNAAF2Q9NVR5 837 aaKnown RBP5.07□□□□□ -1.6
HIPK3-204ENST00000525975 AIPL1Q9NZN9 384 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 TBC1D7Q9P0N9 293 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 ATXN10Q9UBB4 475 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 TBK1Q9UHD2 729 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 NAGPAQ9UK23 515 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 PTPN22Q9Y2R2 807 aa5.07□□□□□ -1.6
HIPK3-204ENST00000525975 DDX60Q8IY21 1712 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 MYH4Q9Y623 1939 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 PARP4Q9UKK3 1724 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 CYP2D7A0A087X1C5 515 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 PVALEFA0A1B0GWK0 134 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 TSPY2A6NKD2 308 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 TMEM110-MUSTN1A8MSY1 372 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 BTNL10A8MVZ5 291 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 ATP6V1G1O75348 118 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 AFPP02771 609 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 ZCCHC18P0CG32 403 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 PLCG2P16885 1265 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 MARK3P27448 753 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 POLGP54098 1239 aaPredicted RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 RASGRF1Q13972 1273 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 CMPK2Q5EBM0 449 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 LRRC55Q6ZSA7 311 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 ZNF571Q7Z3V5 609 aaPredicted RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 SESTD1Q86VW0 696 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 CCNJLQ8IV13 435 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 SRRM1Q8IYB3 904 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 VPS52Q8N1B4 723 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 RASGEF1CQ8N431 466 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 C4orf32Q8N8J7 132 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 LRRC57Q8N9N7 239 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 DTX3LQ8TDB6 740 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 CKAP2Q8WWK9 683 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 SCG3Q8WXD2 468 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 SEC14L1Q92503 715 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 LARP4BQ92615 738 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 INPP5DQ92835 1189 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 DYDC2Q96IM9 177 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 HIC2Q96JB3 615 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 PLEKHG4BQ96PX9 1271 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 RAB34Q9BZG1 259 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 ROPN1BQ9BZX4 212 aaPredicted RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 LRRC27Q9C0I9 530 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 ROPN1Q9HAT0 212 aaPredicted RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 METTL5Q9NRN9 209 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 PNPLA7Q6ZV29 1317 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 LTN1O94822 1766 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 SLIT3O75094 1523 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 NFAT5O94916 1531 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 MYMKA6NI61 221 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 PODXLO00592 558 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 CAPN9O14815 690 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 NOL4O94818 638 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 TJP3O95049 919 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 CBX6O95503 412 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 KRT18P05783 430 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 FAM200BP0CF97 657 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 DEUP1Q05D60 604 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 KLRC3Q07444 240 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 MCL1Q07820 350 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 KPNB1Q14974 876 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 MTFR1Q15390 333 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 DCAF17Q5H9S7 520 aaPredicted RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 FAM47AQ5JRC9 791 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 SEL1L2Q5TEA6 688 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 OR52E8Q6IFG1 317 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 PHLDB3Q6NSJ2 640 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 NT5DC3Q86UY8 548 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 UTP4Q969X6 686 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 ZNF333Q96JL9 665 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 CCDC77Q9BR77 488 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 KIAA1683Q9H0B3 1180 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 ZDHHC18Q9NUE0 388 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 MTUS1Q9ULD2 1270 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 DIS3Q9Y2L1 958 aaKnown RBP5.06□□□□□ -1.6
HIPK3-204ENST00000525975 PASKQ96RG2 1323 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 PCDH11XQ9BZA7 1347 aa5.06□□□□□ -1.6
HIPK3-204ENST00000525975 SPDYE2BA6NHP3 402 aa5.05□□□□□ -1.6
HIPK3-204ENST00000525975 KIAA0391O15091 583 aaKnown RBP5.05□□□□□ -1.6
HIPK3-204ENST00000525975 ZSCAN9O15535 394 aaPredicted RBP5.05□□□□□ -1.6
HIPK3-204ENST00000525975 THAP12O43422 761 aa5.05□□□□□ -1.6
HIPK3-204ENST00000525975 OPHN1O60890 802 aa5.05□□□□□ -1.6
HIPK3-204ENST00000525975 GH1P01241 217 aa5.05□□□□□ -1.6
HIPK3-204ENST00000525975 SPDYE6P0CI01 402 aa5.05□□□□□ -1.6
HIPK3-204ENST00000525975 ACTN1P12814 892 aa5.05□□□□□ -1.6
HIPK3-204ENST00000525975 RARGP13631 454 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms