RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 AFAP1L2Q8N4X5 818 aa5.26□□□□□ -1.57
CD44-219ENST00000525685 GIMAP8Q8ND71 665 aaPredicted RBP5.26□□□□□ -1.57
CD44-219ENST00000525685 CALML6Q8TD86 181 aa5.26□□□□□ -1.57
CD44-219ENST00000525685 TUBGCP5Q96RT8 1024 aa5.26□□□□□ -1.57
CD44-219ENST00000525685 EMC7Q9NPA0 242 aa5.26□□□□□ -1.57
CD44-219ENST00000525685 CDC42EP3Q9UKI2 254 aa5.26□□□□□ -1.57
CD44-219ENST00000525685 OAZ3Q9UMX2 235 aa5.26□□□□□ -1.57
CD44-219ENST00000525685 ZFR2Q9UPR6 939 aaKnown RBP5.26□□□□□ -1.57
CD44-219ENST00000525685 RAD54L2Q9Y4B4 1467 aa5.26□□□□□ -1.57
CD44-219ENST00000525685 A0A0G2JNJ9 132 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.25□□□□□ -1.57
CD44-219ENST00000525685 GOLGA6L22H0YM25 854 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 MATN2O00339 956 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 DVL2O14641 736 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 MUSKO15146 869 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 CR2P20023 1033 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 FNTBP49356 437 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 AMPD3Q01432 767 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 MOGSQ13724 837 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 BROXQ5VW32 411 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 OTOP2Q7RTS6 562 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 ANKRD13AQ8IZ07 590 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 C7orf31Q8N865 590 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 CFHR4Q92496 578 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 SLC5A5Q92911 643 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 KIAA1683Q9H0B3 1180 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 SEMA4AQ9H3S1 761 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 SLC5A4Q9NY91 659 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 Q9UFV3 132 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 NR2E1Q9Y466 385 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 TESMINQ9Y4I5 508 aa5.25□□□□□ -1.57
CD44-219ENST00000525685 UBA6A0AVT1 1052 aaPredicted RBP5.24□□□□□ -1.57
CD44-219ENST00000525685 ARHGAP6O43182 974 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 MAFO75444 373 aaPredicted RBP5.24□□□□□ -1.57
CD44-219ENST00000525685 BPIP17213 487 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 GUCY2FP51841 1108 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 EVA1CP58658 441 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 ROM1Q03395 351 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 DUSP8Q13202 625 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 PCOLCEQ15113 449 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 TTC38Q5R3I4 469 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 AGBL4Q5VU57 503 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 PRAMEF9Q5VWM5 478 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 GRAMD4Q6IC98 578 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 RTN4RL1Q86UN2 441 aaPredicted RBP5.24□□□□□ -1.57
CD44-219ENST00000525685 SPATS2Q86XZ4 545 aaKnown RBP5.24□□□□□ -1.57
CD44-219ENST00000525685 FUKQ8N0W3 1084 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 RTF1Q92541 710 aaKnown RBP5.24□□□□□ -1.57
CD44-219ENST00000525685 FOXRED1Q96CU9 486 aaPredicted RBP5.24□□□□□ -1.57
CD44-219ENST00000525685 GPATCH3Q96I76 525 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 DPYSL5Q9BPU6 564 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 FAM126AQ9BYI3 521 aaPredicted RBP5.24□□□□□ -1.57
CD44-219ENST00000525685 BRINP2Q9C0B6 783 aa5.24□□□□□ -1.57
CD44-219ENST00000525685 SOGA1O94964 1423 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 ABCA5Q8WWZ7 1642 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 ALG1L2C9J202 215 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 MAFGO15525 162 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 GPR39O43194 453 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 RAD17O75943 681 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 MRE11P49959 708 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 SESN3P58005 492 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 SLC6A3Q01959 620 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 ITKQ08881 620 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 FAPQ12884 760 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 EPHA7Q15375 998 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 HS1BP3Q53T59 392 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 SPDYAQ5MJ70 313 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 FRMD7Q6ZUT3 714 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 USP30Q70CQ3 517 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 PRPF38AQ8NAV1 312 aaKnown RBP5.23□□□□□ -1.57
CD44-219ENST00000525685 FERMT2Q96AC1 680 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 OR10A2Q9H208 303 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 HOMER2Q9NSB8 354 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 MSRAQ9UJ68 235 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 SLC30A1Q9Y6M5 507 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 ABCA10Q8WWZ4 1543 aa5.23□□□□□ -1.57
CD44-219ENST00000525685 PBRM1Q86U86 1689 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 AQRO60306 1485 aaKnown RBP eCLIP5.22□□□□□ -1.57
CD44-219ENST00000525685 ST20-MTHFSA0A0A6YYL1 179 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 TGM5O43548 720 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 CDC14BO60729 498 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 EYA4O95677 639 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 COMTP21964 271 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 APEX1P27695 318 aaKnown RBP5.22□□□□□ -1.57
CD44-219ENST00000525685 SMAD3P84022 425 aaKnown RBP5.22□□□□□ -1.57
CD44-219ENST00000525685 ALDH6A1Q02252 535 aaKnown RBP5.22□□□□□ -1.57
CD44-219ENST00000525685 SLFN12LQ6IEE8 588 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 CRIP3Q6Q6R5 217 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 LHFPL2Q6ZUX7 228 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 ESPNLQ6ZVH7 1005 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 PHYKPLQ8IUZ5 450 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 BCL6BQ8N143 479 aaPredicted RBP5.22□□□□□ -1.57
CD44-219ENST00000525685 Q8N1X5 172 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 ZNF610Q8N9Z0 462 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 RPGRQ92834 1020 aaKnown RBP5.22□□□□□ -1.57
CD44-219ENST00000525685 EDAQ92838 391 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 MTMR8Q96EF0 704 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 CEP89Q96ST8 783 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 FOXB1Q99853 325 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 ZNF747Q9BV97 191 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms