RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 KLHL33A6NCF5 533 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 VSTM5A8MXK1 200 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 HRKO00198 91 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 CYP2C8P10632 490 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 TRIM27P14373 513 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 AGXTP21549 392 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 ECE1P42892 770 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 FXR1P51114 621 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP47-206ENST00000525367 CDK17Q00537 523 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 ROM1Q03395 351 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 POU5F1BQ06416 359 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 RAPGEF1Q13905 1077 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 MLANAQ16655 118 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 GRAMD1BQ3KR37 738 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 MINDY4Q4G0A6 757 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 TMEM240Q5SV17 173 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 TIGD7Q6NT04 549 aaPredicted RBP6.11□□□□□ -1.43
USP47-206ENST00000525367 ZC3H18Q86VM9 953 aaKnown RBP6.11□□□□□ -1.43
USP47-206ENST00000525367 SLC41A1Q8IVJ1 513 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 STPG3Q8N7X2 389 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 LRGUKQ96M69 825 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 EPB41L4BQ9H329 900 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 MTG2Q9H4K7 406 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 GCM1Q9NP62 436 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 DCP1AQ9NPI6 582 aaPredicted RBP6.11□□□□□ -1.43
USP47-206ENST00000525367 ANLNQ9NQW6 1124 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 USP25Q9UHP3 1055 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 SERPINB13Q9UIV8 391 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 INTUQ9ULD6 942 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 USP18Q9UMW8 372 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 GPR45Q9Y5Y3 372 aa6.11□□□□□ -1.43
USP47-206ENST00000525367 IGFBP6P24592 240 aaPredicted RBP6.1□□□□□ -1.43
USP47-206ENST00000525367 ADCY8P40145 1251 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 KRT85P78386 507 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 SMAD4Q13485 552 aaKnown RBP6.1□□□□□ -1.43
USP47-206ENST00000525367 EFCAB2Q5VUJ9 269 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 OLFML2BQ68BL8 750 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 B3GNT8Q7Z7M8 397 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 PAF1Q8N7H5 531 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 PPM1NQ8N819 430 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 MZB1Q8WU39 189 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 E2F7Q96AV8 911 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 HSPBAP1Q96EW2 488 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 RNF38Q9H0F5 515 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 OR10A5Q9H207 317 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 DLL4Q9NR61 685 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 ZNF277Q9NRM2 450 aaPredicted RBP6.1□□□□□ -1.43
USP47-206ENST00000525367 ARHGAP20Q9P2F6 1191 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 RCAN3Q9UKA8 241 aa6.1□□□□□ -1.43
USP47-206ENST00000525367 MYPNQ86TC9 1320 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 ST20-MTHFSA0A0A6YYL1 179 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 IL33O95760 270 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 PLA2G1BP04054 148 aaKnown RBP6.09□□□□□ -1.43
USP47-206ENST00000525367 IRX6P78412 446 aaPredicted RBP6.09□□□□□ -1.43
USP47-206ENST00000525367 CD83Q01151 205 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 PPARAQ07869 468 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 MUM1Q2TAK8 710 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 KANK2Q63ZY3 851 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 SARGQ9BW04 601 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 TCF7L1Q9HCS4 588 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 EVLQ9UI08 416 aaPredicted RBP6.09□□□□□ -1.43
USP47-206ENST00000525367 CROTQ9UKG9 612 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 DENND2AQ9ULE3 1009 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 PNMA8BQ9ULN7 279 aaPredicted RBP6.09□□□□□ -1.43
USP47-206ENST00000525367 ANKRD6Q9Y2G4 727 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 GIT1Q9Y2X7 761 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 MRFAP1Q9Y605 127 aa6.09□□□□□ -1.43
USP47-206ENST00000525367 LRRC10BA6NIK2 292 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 OPHN1O60890 802 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 NDUFS2O75306 463 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 ANTXR2P58335 489 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 MRPS9P82933 396 aaKnown RBP6.08□□□□□ -1.44
USP47-206ENST00000525367 FOXO4P98177 505 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 TMEM132EQ6IEE7 984 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 GAREM2Q75VX8 874 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 EPM2AIP1Q7L775 607 aaPredicted RBP6.08□□□□□ -1.44
USP47-206ENST00000525367 CATIPQ7Z7H3 387 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 SPICE1Q8N0Z3 855 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 PJA1Q8NG27 643 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 AUTS2Q8WXX7 1259 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 C11orf84Q9BUA3 381 aaPredicted RBP6.08□□□□□ -1.44
USP47-206ENST00000525367 BTBD2Q9BX70 525 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 PITHD1Q9GZP4 211 aaPredicted RBP6.08□□□□□ -1.44
USP47-206ENST00000525367 DMRT3Q9NQL9 472 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 KCND1Q9NSA2 647 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.08□□□□□ -1.44
USP47-206ENST00000525367 PRSS50Q9UI38 385 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 KCNG1Q9UIX4 513 aa6.08□□□□□ -1.44
USP47-206ENST00000525367 TEX51A0A1B0GUA7 166 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 ERC2O15083 957 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 PEX10O60683 326 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 FGAP02671 866 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 MYBP10242 640 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 CD53P19397 219 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 APEX1P27695 318 aaKnown RBP6.07□□□□□ -1.44
USP47-206ENST00000525367 ZNF267Q14586 743 aaPredicted RBP6.07□□□□□ -1.44
USP47-206ENST00000525367 STILQ15468 1287 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 TARBP2Q15633 366 aaKnown RBP6.07□□□□□ -1.44
USP47-206ENST00000525367 IL31Q6EBC2 164 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 TMEFF1Q8IYR6 380 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms