RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TLR7Q9NYK1 1049 aaKnown RBP5.03□□□□□ -1.6
CD44-213ENST00000525209 POGKQ9P215 609 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 KLHL3Q9UH77 587 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 AKT3Q9Y243 479 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 COQ6Q9Y2Z9 468 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 MTF2Q9Y483 593 aaPredicted RBP5.03□□□□□ -1.6
CD44-213ENST00000525209 GPR45Q9Y5Y3 372 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 BAZ1AQ9NRL2 1556 aaPredicted RBP5.03□□□□□ -1.6
CD44-213ENST00000525209 CCDC66A2RUB6 948 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 PDE2AO00408 941 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 DDX3XO00571 662 aaKnown RBP eCLIP5.02□□□□□ -1.61
CD44-213ENST00000525209 SLC7A4O43246 635 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 NDUFS2O75306 463 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 FSBPO95073 299 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 THBS1P07996 1170 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 CELA2BP08218 269 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 ZNF865P0CJ78 1059 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 HOXD8P13378 290 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 ALOX15P16050 662 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 ATP5DP30049 168 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 HOXC12P31275 282 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 SERPINF1P36955 418 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 HNF4AP41235 474 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 LIMK1P53667 647 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 RCAN1P53805 252 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 CASP6P55212 293 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 KIF23Q02241 960 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 UBXN1Q04323 297 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 PDE4BQ07343 736 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 PCDH1Q08174 1060 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 MAPK7Q13164 816 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 PMS2P11Q13670 270 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 INPP5AQ14642 412 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 TNIP1Q15025 636 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 PDCD1Q15116 288 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 RASA2Q15283 850 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 TAF7Q15545 349 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 ZKSCAN8Q15776 578 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 SMAD2Q15796 467 aaKnown RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 KRTCAP3Q53RY4 240 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 MAP1SQ66K74 1059 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 RAPH1Q70E73 1250 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 USP53Q70EK8 1073 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 OTUD6AQ7L8S5 288 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 DNAJB7Q7Z6W7 309 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 MOGAT3Q86VF5 341 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 CREG2Q8IUH2 290 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 ZC3H7AQ8IWR0 971 aaKnown RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 TRIML1Q8N9V2 468 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 TMEM145Q8NBT3 493 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 OR10H5Q8NGA6 315 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 GOT1L1Q8NHS2 421 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 RUFY2Q8WXA3 655 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 PLPPR2Q96GM1 343 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 RBM18Q96H35 190 aaKnown RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 EYA3Q99504 573 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 C7orf25Q9BPX7 421 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 AGXT2Q9BYV1 514 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 UNKQ9C0B0 810 aaKnown RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 OBP2BQ9NPH6 170 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 TMOD4Q9NZQ9 345 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 KIF17Q9P2E2 1029 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 TUBD1Q9UJT1 453 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 PCDHA4Q9UN74 947 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 NOC2LQ9Y3T9 749 aaKnown RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 ZFP37Q9Y6Q3 630 aaPredicted RBP5.02□□□□□ -1.61
CD44-213ENST00000525209 PDS5BQ9NTI5 1447 aa5.02□□□□□ -1.61
CD44-213ENST00000525209 PASKQ96RG2 1323 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 THOC2Q8NI27 1593 aaKnown RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 LGALS16A8MUM7 142 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 H0Y626 953 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 SYT5O00445 386 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 NPC1O15118 1278 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 DTNBO60941 627 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 TBCAO75347 108 aaKnown RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 RTN3O95197 1032 aaPredicted RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 GDF11O95390 407 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 PLATP00750 562 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 F11P03951 625 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 CYP17A1P05093 508 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 SCG5P05408 212 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 PSAPP07602 524 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 CLTBP09497 229 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 HARSP12081 509 aaKnown RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 SCG2P13521 617 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 RPS2P15880 293 aaKnown RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 PORP16435 677 aaPredicted RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 ATP5F1P24539 256 aaPredicted RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 LSP1P33241 339 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 TRPC1P48995 793 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 POLD2P49005 469 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 MTNR1BP49286 362 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 RNASE9P60153 205 aaKnown RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 RAC1P63000 192 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 VAMP2P63027 116 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 IFI35P80217 286 aaPredicted RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 CALD1Q05682 793 aaKnown RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 LRRC74AQ0VAA2 488 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 AP1B1Q10567 949 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms