RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 ECHDC2Q86YB7 292 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 DIS3L2Q8IYB7 885 aaKnown RBP14.05□□□□□ -0.16
SMCO4-202ENST00000525141 ZNF710Q8N1W2 664 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 PABPC5Q96DU9 382 aaKnown RBP14.05□□□□□ -0.16
SMCO4-202ENST00000525141 INTS4Q96HW7 963 aaKnown RBP14.05□□□□□ -0.16
SMCO4-202ENST00000525141 DYDC2Q96IM9 177 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 MTMR9Q96QG7 549 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 MAP7D2Q96T17 732 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 HSD17B14Q9BPX1 270 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 CYP26B1Q9NR63 512 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 SMC3Q9UQE7 1217 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 PCDHGC5Q9Y5F6 944 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 A0A087WWV3 80 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 A0A0U1RQF3 1178 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 LINC01565O15544 149 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 IL9P15248 144 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 ATF7P17544 494 aaPredicted RBP14.04□□□□□ -0.16
SMCO4-202ENST00000525141 GJB2P29033 226 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 ERVFC1P60507 584 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 ADAM15Q13444 863 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 CTTNQ14247 550 aaKnown RBP14.04□□□□□ -0.16
SMCO4-202ENST00000525141 TIGD5Q53EQ6 642 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 C4orf19Q8IY42 314 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 POF1BQ8WVV4 589 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 NAP1L4Q99733 375 aaKnown RBP14.04□□□□□ -0.16
SMCO4-202ENST00000525141 TMEM60Q9H2L4 133 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 FOXP1Q9H334 677 aaPredicted RBP14.04□□□□□ -0.16
SMCO4-202ENST00000525141 EPHX3Q9H6B9 360 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 DHX33Q9H6R0 707 aaKnown RBP14.04□□□□□ -0.16
SMCO4-202ENST00000525141 ATP6V0A4Q9HBG4 840 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 IFT122Q9HBG6 1241 aa14.04□□□□□ -0.16
SMCO4-202ENST00000525141 GUCY1B3Q02153 619 aa14.03□□□□□ -0.16
SMCO4-202ENST00000525141 CLLU1OSQ5K130 101 aa14.03□□□□□ -0.16
SMCO4-202ENST00000525141 NCAPH2Q6IBW4 605 aa14.03□□□□□ -0.16
SMCO4-202ENST00000525141 RHPN2Q8IUC4 686 aa14.03□□□□□ -0.16
SMCO4-202ENST00000525141 FAM178BQ8IXR5 827 aa14.03□□□□□ -0.16
SMCO4-202ENST00000525141 PRPF31Q8WWY3 499 aaKnown RBP14.03□□□□□ -0.16
SMCO4-202ENST00000525141 NLRP7Q8WX94 980 aa14.03□□□□□ -0.16
SMCO4-202ENST00000525141 TMEM143Q96AN5 459 aa14.03□□□□□ -0.16
SMCO4-202ENST00000525141 GCOM2Q9BZD3 368 aaPredicted RBP14.03□□□□□ -0.16
SMCO4-202ENST00000525141 IGFLR1Q9H665 355 aa14.03□□□□□ -0.16
SMCO4-202ENST00000525141 PLXNA4Q9HCM2 1894 aa14.03□□□□□ -0.16
SMCO4-202ENST00000525141 CSPG5O95196 566 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 BAG4O95429 457 aaKnown RBP14.02□□□□□ -0.17
SMCO4-202ENST00000525141 ZSCAN20P17040 1043 aaPredicted RBP14.02□□□□□ -0.17
SMCO4-202ENST00000525141 U2AF2P26368 475 aaKnown RBP eCLIP14.02□□□□□ -0.17
SMCO4-202ENST00000525141 CDC42EP1Q00587 391 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 PTCRAQ6ISU1 281 aaPredicted RBP14.02□□□□□ -0.17
SMCO4-202ENST00000525141 TPH2Q8IWU9 490 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 SLFN12Q8IYM2 578 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 COLGALT1Q8NBJ5 622 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 CEP170P1Q96L14 293 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 EIF2AK1Q9BQI3 630 aaKnown RBP14.02□□□□□ -0.17
SMCO4-202ENST00000525141 LXNQ9BS40 222 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 TRAIPQ9BWF2 469 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 TMEM117Q9H0C3 514 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 MINDY3Q9H8M7 445 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 XPNPEP1Q9NQW7 623 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 CHST12Q9NRB3 414 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 CLDND1Q9NY35 253 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 PCDHA12Q9UN75 941 aa14.02□□□□□ -0.17
SMCO4-202ENST00000525141 MEIS3P2A8K0S8 358 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 FSCN2O14926 492 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 MARCH6O60337 910 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 FGF18O76093 207 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 LYPLA2O95372 231 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 EOMESO95936 686 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 PDCP20941 246 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 HOXA11P31270 313 aaPredicted RBP14.01□□□□□ -0.17
SMCO4-202ENST00000525141 YWHABP31946 246 aaKnown RBP14.01□□□□□ -0.17
SMCO4-202ENST00000525141 TXKP42681 527 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 DNM2P50570 870 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 CYP4A11Q02928 519 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 LARP1BQ659C4 914 aaKnown RBP14.01□□□□□ -0.17
SMCO4-202ENST00000525141 ZNF410Q86VK4 478 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 HSCBQ8IWL3 235 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 ZSWIM4Q9H7M6 989 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 TTC12Q9H892 705 aaPredicted RBP14.01□□□□□ -0.17
SMCO4-202ENST00000525141 CLEC1BQ9P126 229 aa14.01□□□□□ -0.17
SMCO4-202ENST00000525141 PER2O15055 1255 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 NCK2O43639 380 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 SRGAP2CP0DJJ0 459 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 SPATA31C1P0DKV0 1188 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 PBX3P40426 434 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 PHKA2P46019 1235 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 RBM10P98175 930 aaKnown RBP14□□□□□ -0.17
SMCO4-202ENST00000525141 PLCB3Q01970 1234 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 LAMTOR4Q0VGL1 99 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 CALCRLQ16602 461 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 XKR9Q5GH70 373 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 UBXN11Q5T124 520 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 EP400NLQ6ZTU2 488 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 RBM23Q86U06 439 aaKnown RBP14□□□□□ -0.17
SMCO4-202ENST00000525141 NOSTRINQ8IVI9 506 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 C4orf32Q8N8J7 132 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 HELQQ8TDG4 1101 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 LPPQ93052 612 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 MSLNLQ96KJ4 702 aa14□□□□□ -0.17
SMCO4-202ENST00000525141 BMP2KQ9NSY1 1161 aaPredicted RBP14□□□□□ -0.17
SMCO4-202ENST00000525141 PCDHB12Q9Y5F1 795 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms