RNA–Protein interactions for RNA: ENST00000524966.1

AP001001.2-201, humanhuman

TSL 3 BASIC

Gene AP001001.2, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001001.2-201ENST00000524966 CCT6AP40227 531 aaKnown RBP12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 SARSP49591 514 aaKnown RBP12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 ERVK-21P61565 698 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 NPAS4Q8IUM7 802 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 HSCBQ8IWL3 235 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 NLRP4Q96MN2 994 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 YME1L1Q96TA2 773 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 MTRQ99707 1265 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 RAB34Q9BZG1 259 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 INO80BQ9C086 356 aaPredicted RBP12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 MINDY3Q9H8M7 445 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 C1orf112Q9NSG2 853 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 KIAA1024Q9UPX6 916 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 ARID2Q68CP9 1835 aa12.04□□□□□ -0.48
AP001001.2-201ENST00000524966 TTC28Q96AY4 2481 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 DENND3A2RUS2 1198 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 LINC00271P0C7V0 271 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 CYP11B2P19099 503 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 POU3F3P20264 500 aaPredicted RBP12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 POU5F1BQ06416 359 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 MXD4Q14582 209 aaPredicted RBP12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 PTPAQ15257 358 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 KRT79Q5XKE5 535 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 HAUS3Q68CZ6 603 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 FAM173BQ6P4H8 233 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 SRGAP1Q7Z6B7 1085 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 SNX29Q8TEQ0 813 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 ARNTL2Q8WYA1 636 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 SCLT1Q96NL6 688 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 TGS1Q96RS0 853 aaKnown RBP12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 ATP6V0A4Q9HBG4 840 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 CHST12Q9NRB3 414 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 DDX19AQ9NUU7 478 aaKnown RBP12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 REV3LO60673 3130 aa12.03□□□□□ -0.48
AP001001.2-201ENST00000524966 A0A0U1RQF3 1178 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 VWA3AA6NCI4 1184 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 LPXNO60711 386 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 USO1O60763 962 aaKnown RBP12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 BMP15O95972 392 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 STAG3L1P0CL83 205 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 FOSL2P15408 326 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 ZSCAN20P17040 1043 aaPredicted RBP12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 GLRA2P23416 452 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 PTENP60484 403 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 GRIN1Q05586 938 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 HYIQ5T013 277 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 PADI6Q6TGC4 694 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 KCNK18Q7Z418 384 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 IFNLR1Q8IU57 520 aaPredicted RBP12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 RNF149Q8NC42 400 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 ASAP3Q8TDY4 903 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 PNMA5Q96PV4 448 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 C17orf80Q9BSJ5 609 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 TRAIPQ9BWF2 469 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 BHMT2Q9H2M3 363 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 ELAC1Q9H777 363 aaKnown RBP12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 GPRC5CQ9NQ84 441 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 PCDHB7Q9Y5E2 793 aa12.02□□□□□ -0.49
AP001001.2-201ENST00000524966 COL4A6Q14031 1691 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 ARHGEF35A5YM69 484 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 E9PMD0 336 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 EYA4O95677 639 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 SFPQP23246 707 aaKnown RBP eCLIP12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 HOXA11P31270 313 aaPredicted RBP12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 GATMP50440 423 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 CAPSQ13938 189 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 FAM102BQ5T8I3 360 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 MAEAQ7L5Y9 396 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 CATSPER4Q7RTX7 472 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 ECHDC2Q86YB7 292 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 FIBCD1Q8N539 461 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 KCTD17Q8N5Z5 321 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 MCPH1Q8NEM0 835 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 CLP1Q92989 425 aaKnown RBP12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 AK8Q96MA6 479 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 CCDC43Q96MW1 224 aaKnown RBP12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 GAS2L1Q99501 681 aaPredicted RBP12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 ZSCAN16Q9H4T2 348 aaPredicted RBP12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 TMEM161AQ9NX61 479 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 DNM3Q9UQ16 869 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 UNC80Q8N2C7 3258 aa12.01□□□□□ -0.49
AP001001.2-201ENST00000524966 FNDC1Q4ZHG4 1894 aaPredicted RBP12□□□□□ -0.49
AP001001.2-201ENST00000524966 ZNF623O75123 536 aa12□□□□□ -0.49
AP001001.2-201ENST00000524966 EOMESO95936 686 aa12□□□□□ -0.49
AP001001.2-201ENST00000524966 PDIA4P13667 645 aaKnown RBP12□□□□□ -0.49
AP001001.2-201ENST00000524966 ATF7P17544 494 aaPredicted RBP12□□□□□ -0.49
AP001001.2-201ENST00000524966 IGFBP4P22692 258 aa12□□□□□ -0.49
AP001001.2-201ENST00000524966 BMPR1AP36894 532 aa12□□□□□ -0.49
AP001001.2-201ENST00000524966 PHKA2P46019 1235 aa12□□□□□ -0.49
AP001001.2-201ENST00000524966 GRB10Q13322 594 aa12□□□□□ -0.49
AP001001.2-201ENST00000524966 TFDP1Q14186 410 aa12□□□□□ -0.49
AP001001.2-201ENST00000524966 BTG3Q14201 252 aaPredicted RBP12□□□□□ -0.49
AP001001.2-201ENST00000524966 EPC2Q52LR7 807 aa12□□□□□ -0.49
AP001001.2-201ENST00000524966 TMEM192Q8IY95 271 aa12□□□□□ -0.49
AP001001.2-201ENST00000524966 CMTR2Q8IYT2 770 aaKnown RBP12□□□□□ -0.49
AP001001.2-201ENST00000524966 MAFAQ8NHW3 353 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms