RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 SUCLA2Q9P2R7 463 aaPredicted RBP21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 USP15Q9Y4E8 981 aaPredicted RBP21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 HIDE1A8MVS5 230 aa21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 PFKFB2O60825 505 aa21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 EOMESO95936 686 aa21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 KCNC3Q14003 757 aa21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 PLPP4Q5VZY2 271 aa21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 KSR1Q8IVT5 923 aa21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 ZNF579Q8NAF0 562 aaKnown RBP21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 HELQQ8TDG4 1101 aa21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 ZNF558Q96NG5 402 aa21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 TCF25Q9BQ70 676 aa21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 WRAP73Q9P2S5 460 aaPredicted RBP21.1■□□□□ 0.97
PTP4A3-206ENST00000524028 CCDC194A0A1B0GVG4 234 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 CDKL5O76039 1030 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 DNM2P50570 870 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 NPEPPSP55786 919 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 CDC42EP1Q00587 391 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 PPP2R5CQ13362 524 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 HERC4Q5GLZ8 1057 aaPredicted RBP21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 EARS2Q5JPH6 523 aaKnown RBP21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 PPP4R3AQ6IN85 833 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 NEK8Q86SG6 692 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 RHPN2Q8IUC4 686 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 HAS1Q92839 578 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 CDCA3Q99618 268 aaPredicted RBP21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 CHST12Q9NRB3 414 aa21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 PUF60Q9UHX1 559 aaKnown RBP21.09■□□□□ 0.97
PTP4A3-206ENST00000524028 STK36Q9NRP7 1315 aa21.08■□□□□ 0.97
PTP4A3-206ENST00000524028 LOC730098B7Z3J9 87 aa21.08■□□□□ 0.97
PTP4A3-206ENST00000524028 PHKA2P46019 1235 aa21.08■□□□□ 0.97
PTP4A3-206ENST00000524028 TMEM184AQ6ZMB5 413 aa21.08■□□□□ 0.97
PTP4A3-206ENST00000524028 PIK3AP1Q6ZUJ8 805 aa21.08■□□□□ 0.97
PTP4A3-206ENST00000524028 SLC39A11Q8N1S5 342 aa21.08■□□□□ 0.97
PTP4A3-206ENST00000524028 FAM20AQ96MK3 541 aa21.08■□□□□ 0.97
PTP4A3-206ENST00000524028 CYP26B1Q9NR63 512 aa21.08■□□□□ 0.97
PTP4A3-206ENST00000524028 DACT1Q9NYF0 836 aa21.08■□□□□ 0.97
PTP4A3-206ENST00000524028 SPG21Q9NZD8 308 aa21.08■□□□□ 0.97
PTP4A3-206ENST00000524028 PPM1AP35813 382 aa21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 QARSP47897 775 aaKnown RBP21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 LONRF3Q496Y0 759 aa21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 ZNF410Q86VK4 478 aa21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 SUSD6Q92537 303 aa21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 LPPQ93052 612 aa21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 NLRP4Q96MN2 994 aa21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 TRAIPQ9BWF2 469 aa21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 S1PR5Q9H228 398 aa21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 NGRNQ9NPE2 291 aaKnown RBP21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 ENTPD7Q9NQZ7 604 aa21.07■□□□□ 0.96
PTP4A3-206ENST00000524028 FAM205CA6NFA0 338 aa21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 MEIS3P2A8K0S8 358 aa21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 NT5C1B-RDH14C9J2C7 533 aa21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 CCNT1O60563 726 aaKnown RBP21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 FDPSP14324 419 aaKnown RBP21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 GCFC2P16383 781 aaKnown RBP21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 SFPQP23246 707 aaKnown RBP eCLIP21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 AK2P54819 239 aa21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 KRT17Q04695 432 aa21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 CBX2Q14781 532 aaPredicted RBP21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 LLGL2Q6P1M3 1020 aa21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 SYCE2Q6PIF2 218 aa21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 HFE2Q6ZVN8 426 aa21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 IFT122Q9HBG6 1241 aa21.06■□□□□ 0.96
PTP4A3-206ENST00000524028 P4HBP07237 508 aaKnown RBP21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 XBP1P17861 261 aa21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 HOXD11P31277 338 aaPredicted RBP21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 TECP42680 631 aa21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 BCAR1P56945 870 aa21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 TWF2Q6IBS0 349 aaKnown RBP21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 ANKRD54Q6NXT1 300 aa21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 TMC7Q7Z402 723 aa21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 POTEDQ86YR6 584 aa21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 APOL5Q9BWW9 433 aa21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 PHF7Q9BWX1 381 aaPredicted RBP21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 INO80BQ9C086 356 aaPredicted RBP21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 ORC3Q9UBD5 711 aaPredicted RBP21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 PIN4Q9Y237 131 aaKnown RBP21.05■□□□□ 0.96
PTP4A3-206ENST00000524028 FSD2A1L4K1 749 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 ZBTB39O15060 712 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 TBX3O15119 743 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 SPIRE1Q08AE8 756 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 NR5A1Q13285 461 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 CATSPER4Q7RTX7 472 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 TMEM173Q86WV6 379 aaPredicted RBP21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 MRPL43Q8N983 215 aaKnown RBP21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 NECAB1Q8N987 351 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 EDAQ92838 391 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 TNFRSF25Q93038 417 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 TMEM143Q96AN5 459 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 RPGRIP1Q96KN7 1286 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 CEP170P1Q96L14 293 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 JPH2Q9BR39 696 aaPredicted RBP21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 MRPL9Q9BYD2 267 aaKnown RBP21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 DHX33Q9H6R0 707 aaKnown RBP21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 FAM105AQ9NUU6 356 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 RGL1Q9NZL6 768 aa21.04■□□□□ 0.96
PTP4A3-206ENST00000524028 C2orf71A6NGG8 1288 aa21.03■□□□□ 0.96
PTP4A3-206ENST00000524028 LARGE1O95461 756 aa21.03■□□□□ 0.96
PTP4A3-206ENST00000524028 ALDH7A1P49419 539 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms