RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	SNRPF	P62306	86 aa	Known RBP	11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	MYBPC2	Q14324	1141 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	NAA30	Q147X3	362 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	TMEM132B	Q14DG7	1078 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	STXBP2	Q15833	593 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	C10orf76	Q5T2E6	689 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	CCDC181	Q5TID7	509 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	INTS8	Q75QN2	995 aa	Known RBP	11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	CCDC155	Q8N6L0	562 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	FAM133A	Q8N9E0	248 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	MCPH1	Q8NEM0	835 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	REPS2	Q8NFH8	660 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	BICD1	Q96G01	975 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	RPGRIP1	Q96KN7	1286 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	GAN	Q9H2C0	597 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	POLD4	Q9HCU8	107 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	CYP39A1	Q9NYL5	469 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	ARHGAP20	Q9P2F6	1191 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	SLC9A2	Q9UBY0	812 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	TRIM10	Q9UDY6	481 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	KCNG1	Q9UIX4	513 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	ZNF214	Q9UL59	606 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	AFG3L2	Q9Y4W6	797 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	SAR1B	Q9Y6B6	198 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	SNCAIP	Q9Y6H5	919 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	HTT	P42858	3142 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006		A0A0U1RQJ8	604 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	ZBTB39	O15060	712 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	DHX15	O43143	795 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	PLEK	P08567	350 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	STAT1	P42224	750 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	PEX3	P56589	373 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	KCNMA1	Q12791	1236 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	SH3D19	Q5HYK7	790 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	UTP14C	Q5TAP6	766 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	PLA2G4F	Q68DD2	849 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	FBXO38	Q6PIJ6	1188 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	VSIG10L	Q86VR7	867 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	NCAPG2	Q86XI2	1143 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	RASAL3	Q86YV0	1011 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	GPIHBP1	Q8IV16	184 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	DNER	Q8NFT8	737 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	ATRIP	Q8WXE1	791 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	VTI1A	Q96AJ9	217 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	OTUD5	Q96G74	571 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	WNK4	Q96J92	1243 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	CEP170P1	Q96L14	293 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	INPP4A	Q96PE3	977 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	SENP7	Q9BQF6	1050 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	ELP3	Q9H9T3	547 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	ATP6V0A4	Q9HBG4	840 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	A1CF	Q9NQ94	594 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	KMT5A	Q9NQR1	393 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	GABBR1	Q9UBS5	961 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	FZD1	Q9UP38	647 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	RIPK3	Q9Y572	518 aa		11.74	□□□□□ -0.53
SPIDR-222	ENST00000524006	ZSWIM8	A7E2V4	1837 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	SLC16A4	O15374	487 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	TGFB1I1	O43294	461 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	USP2	O75604	605 aa	Predicted RBP	11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	LCA5L	O95447	670 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	TUBB	P07437	444 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	UCHL3	P15374	230 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	OSBP	P22059	807 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	HOXD13	P35453	343 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	FMO5	P49326	533 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	CASP4	P49662	377 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	PRKCE	Q02156	737 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	GFPT1	Q06210	699 aa	Predicted RBP	11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	BFSP1	Q12934	665 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	UGCG	Q16739	394 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	KLHDC7A	Q5VTJ3	777 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	FAM160B1	Q5W0V3	765 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	ARMC9	Q7Z3E5	817 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	HAUS6	Q7Z4H7	955 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	SLC9A9	Q8IVB4	645 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	KSR1	Q8IVT5	923 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	ANKRD13A	Q8IZ07	590 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	XXYLT1	Q8NBI6	393 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	SLC35C1	Q96A29	364 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	PAGR1	Q9BTK6	254 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	INTS2	Q9H0H0	1204 aa	Known RBP	11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	ADAMTS5	Q9UNA0	930 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	JRKL	Q9Y4A0	524 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	HYOU1	Q9Y4L1	999 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	FHOD1	Q9Y613	1164 aa		11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	MKI67	P46013	3256 aa	Known RBP	11.73	□□□□□ -0.53
SPIDR-222	ENST00000524006	KAT6A	Q92794	2004 aa		11.72	□□□□□ -0.53
SPIDR-222	ENST00000524006	CENPF	P49454	3210 aa		11.72	□□□□□ -0.53
SPIDR-222	ENST00000524006	IGSF9B	Q9UPX0	1349 aa		11.72	□□□□□ -0.53
SPIDR-222	ENST00000524006	DGAT1	O75907	488 aa		11.72	□□□□□ -0.53
SPIDR-222	ENST00000524006	CLSTN1	O94985	981 aa		11.72	□□□□□ -0.53
SPIDR-222	ENST00000524006	MOCS3	O95396	460 aa		11.72	□□□□□ -0.53
SPIDR-222	ENST00000524006	CCNE2	O96020	404 aa		11.72	□□□□□ -0.53
SPIDR-222	ENST00000524006	ACTN1	P12814	892 aa		11.72	□□□□□ -0.53
SPIDR-222	ENST00000524006	SLC9A1	P19634	815 aa		11.72	□□□□□ -0.53
SPIDR-222	ENST00000524006	PON1	P27169	355 aa		11.72	□□□□□ -0.53

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