RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 RAD54LQ92698 747 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 LRCH3Q96II8 777 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 SPATA32Q96LK8 384 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 GCOM2Q9BZD3 368 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-224ENST00000523873 ST3GAL5Q9UNP4 418 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 SLC4A7Q9Y6M7 1214 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 ABHD14A-ACY1A0A1B0GW23 586 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.23□□□□□ -0.13
VEGFA-224ENST00000523873 SLC26A4O43511 780 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 MGEA5O60502 916 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 BAIAP3O94812 1187 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 EIF4BP23588 611 aaKnown RBP14.23□□□□□ -0.13
VEGFA-224ENST00000523873 KCNJ6P48051 423 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 FAM117BQ6P1L5 589 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 C1orf186Q6ZWK4 172 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 RTN4RL1Q86UN2 441 aaPredicted RBP14.23□□□□□ -0.13
VEGFA-224ENST00000523873 ZNF410Q86VK4 478 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 MCPH1Q8NEM0 835 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 APBB2Q92870 758 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 MTIF3Q9H2K0 278 aaKnown RBP14.23□□□□□ -0.13
VEGFA-224ENST00000523873 MINDY3Q9H8M7 445 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 IFT122Q9HBG6 1241 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 CCDC39Q9UFE4 941 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 ATP6V1DQ9Y5K8 247 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 SQORQ9Y6N5 450 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 TRIP11Q15643 1979 aa14.23□□□□□ -0.13
VEGFA-224ENST00000523873 MYO9BQ13459 2157 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 SFI1A8K8P3 1242 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 HIP1RO75146 1068 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 MYOGP15173 224 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 TXLNAP40222 546 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 PBX2P40425 430 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 MAPK7Q13164 816 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 NAALADL2Q58DX5 795 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 RRAGBQ5VZM2 374 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 GPBP1Q86WP2 473 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 MYOCDQ8IZQ8 938 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 DAW1Q8N136 415 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 USP38Q8NB14 1042 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 LARP4BQ92615 738 aaKnown RBP14.22□□□□□ -0.13
VEGFA-224ENST00000523873 KIFC3Q9BVG8 833 aa14.22□□□□□ -0.13
VEGFA-224ENST00000523873 LRRIQ4A6NIV6 560 aa14.21□□□□□ -0.13
VEGFA-224ENST00000523873 ENPP3O14638 875 aa14.21□□□□□ -0.13
VEGFA-224ENST00000523873 GPR182O15218 404 aa14.21□□□□□ -0.13
VEGFA-224ENST00000523873 ASAP2O43150 1006 aa14.21□□□□□ -0.13
VEGFA-224ENST00000523873 UPP2O95045 317 aa14.21□□□□□ -0.13
VEGFA-224ENST00000523873 ATP2A2P16615 1042 aaKnown RBP14.21□□□□□ -0.13
VEGFA-224ENST00000523873 STAT6P42226 847 aa14.21□□□□□ -0.13
VEGFA-224ENST00000523873 TFDP1Q14186 410 aa14.21□□□□□ -0.13
VEGFA-224ENST00000523873 MXD4Q14582 209 aaPredicted RBP14.21□□□□□ -0.13
VEGFA-224ENST00000523873 LRIT3Q3SXY7 679 aa14.21□□□□□ -0.13
VEGFA-224ENST00000523873 ARSHQ5FYA8 562 aa14.21□□□□□ -0.13
VEGFA-224ENST00000523873 CIZ1Q9ULV3 898 aaPredicted RBP14.21□□□□□ -0.13
VEGFA-224ENST00000523873 COL4A6Q14031 1691 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 ADGRA3Q8IWK6 1321 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-224ENST00000523873 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-224ENST00000523873 AMHP03971 560 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 PHKA2P46019 1235 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 PTENP60484 403 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 CDC42EP1Q00587 391 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 MBTD1Q05BQ5 628 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 DSC3Q14574 896 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 RESP18Q5W5W9 173 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 CATSPER4Q7RTX7 472 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 SRGAP1Q7Z6B7 1085 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 HERC6Q8IVU3 1022 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 KCTD17Q8N5Z5 321 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 STAMQ92783 540 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 DHX58Q96C10 678 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 SLC9A7Q96T83 725 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 ADAM2Q99965 735 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 PBX4Q9BYU1 374 aa14.2□□□□□ -0.14
VEGFA-224ENST00000523873 YBX2Q9Y2T7 364 aaKnown RBP14.2□□□□□ -0.14
VEGFA-224ENST00000523873 TDRD15B5MCY1 1934 aaKnown RBP14.19□□□□□ -0.14
VEGFA-224ENST00000523873 INO80B-WBP1J3KQ70 363 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 EFCAB14O75071 495 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 LIG1P18858 919 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 SFPQP23246 707 aaKnown RBP eCLIP14.19□□□□□ -0.14
VEGFA-224ENST00000523873 GUCY2CP25092 1073 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 FXR1P51114 621 aaKnown RBP eCLIP14.19□□□□□ -0.14
VEGFA-224ENST00000523873 PEX3P56589 373 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 E2F4Q16254 413 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 ODR4Q5SWX8 454 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 CCDC73Q6ZRK6 1079 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 ZNF710Q8N1W2 664 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 DEPTORQ8TB45 409 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 KIFAP3Q92845 792 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 REEP2Q9BRK0 252 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 FTHL17Q9BXU8 183 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 INO80BQ9C086 356 aaPredicted RBP14.19□□□□□ -0.14
VEGFA-224ENST00000523873 TSPYL2Q9H2G4 693 aaPredicted RBP14.19□□□□□ -0.14
VEGFA-224ENST00000523873 CHMP5Q9NZZ3 219 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 STK17AQ9UEE5 414 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 USP20Q9Y2K6 914 aa14.19□□□□□ -0.14
VEGFA-224ENST00000523873 RALGAPA2Q2PPJ7 1873 aa14.18□□□□□ -0.14
VEGFA-224ENST00000523873 A0A1B0GVL5 298 aa14.18□□□□□ -0.14
VEGFA-224ENST00000523873 DENND3A2RUS2 1198 aa14.18□□□□□ -0.14
VEGFA-224ENST00000523873 LCHNA4D1U4 455 aa14.18□□□□□ -0.14
VEGFA-224ENST00000523873 MYMKA6NI61 221 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms