RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	HSD17B14	Q9BPX1	270 aa		13.85	□□□□□ -0.19
VEGFA-223	ENST00000523125	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.85	□□□□□ -0.19
VEGFA-223	ENST00000523125	JPH2	Q9BR39	696 aa	Predicted RBP	13.85	□□□□□ -0.19
VEGFA-223	ENST00000523125	TMEM117	Q9H0C3	514 aa		13.85	□□□□□ -0.19
VEGFA-223	ENST00000523125	TMEM60	Q9H2L4	133 aa		13.85	□□□□□ -0.19
VEGFA-223	ENST00000523125	ZSWIM4	Q9H7M6	989 aa		13.85	□□□□□ -0.19
VEGFA-223	ENST00000523125	TTC12	Q9H892	705 aa	Predicted RBP	13.85	□□□□□ -0.19
VEGFA-223	ENST00000523125	CD320	Q9NPF0	282 aa		13.85	□□□□□ -0.19
VEGFA-223	ENST00000523125	PPME1	Q9Y570	386 aa		13.85	□□□□□ -0.19
VEGFA-223	ENST00000523125	GRXCR2	A6NFK2	248 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	NEMF	O60524	1076 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	CSPG5	O95196	566 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	EOMES	O95936	686 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	RFC5	P40937	340 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	TXK	P42681	527 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	RBM25	P49756	843 aa	Known RBP	13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	DLX2	Q07687	328 aa	Predicted RBP	13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	ADGRD2	Q7Z7M1	963 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	TPH2	Q8IWU9	490 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	COLGALT1	Q8NBJ5	622 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	SLC7A3	Q8WY07	619 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	TMEM143	Q96AN5	459 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	TRAIP	Q9BWF2	469 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	CHST12	Q9NRB3	414 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	CLDND1	Q9NY35	253 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	PCDHB12	Q9Y5F1	795 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	PCDHGC5	Q9Y5F6	944 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	COL4A3BP	Q9Y5P4	624 aa		13.84	□□□□□ -0.19
VEGFA-223	ENST00000523125	LINC01565	O15544	149 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	HOXA2	O43364	376 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	NCK2	O43639	380 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	FGF18	O76093	207 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	LYPLA2	O95372	231 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	IL9	P15248	144 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	SFPQ	P23246	707 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	PHKA2	P46019	1235 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	POLG	P54098	1239 aa	Predicted RBP	13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	LAMTOR4	Q0VGL1	99 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	ADAM15	Q13444	863 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	EMC2	Q15006	297 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	XKR9	Q5GH70	373 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	SPOUT1	Q5T280	376 aa	Known RBP	13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	OTUD6A	Q7L8S5	288 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	FAM178B	Q8IXR5	827 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	EXOC8	Q8IYI6	725 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	FBXO18	Q8NFZ0	1043 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	C8orf76	Q96K31	380 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	NLRP4	Q96MN2	994 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	INO80B	Q9C086	356 aa	Predicted RBP	13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	MINDY3	Q9H8M7	445 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	XPNPEP1	Q9NQW7	623 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	AAAS	Q9NRG9	546 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	DACT1	Q9NYF0	836 aa		13.83	□□□□□ -0.2
VEGFA-223	ENST00000523125	TBX10	O75333	385 aa		13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	SRGAP2C	P0DJJ0	459 aa		13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	LAG3	P18627	525 aa		13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	MCM7	P33993	719 aa		13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	ERVFC1	P60507	584 aa		13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	UBE3A	Q05086	875 aa		13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	SAFB	Q15424	915 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	EP400NL	Q6ZTU2	488 aa		13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	RNF169	Q8NCN4	708 aa		13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	HELQ	Q8TDG4	1101 aa		13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	PSPC1	Q8WXF1	523 aa	Known RBP	13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	1e-9	■■■□□ 15.1
VEGFA-223	ENST00000523125	FOXP1	Q9H334	677 aa	Predicted RBP	13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	IGFLR1	Q9H665	355 aa		13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125	TDRD15	B5MCY1	1934 aa	Known RBP	13.82	□□□□□ -0.2
VEGFA-223	ENST00000523125		A0A087WWV3	80 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	POTEM	A6NI47	508 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	MEIS3P2	A8K0S8	358 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	GAS2	O43903	313 aa	Known RBP	13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	ZNF623	O75123	536 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	SPATA31C1	P0DKV0	1188 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	ATP2B1	P20020	1258 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	HOXA11	P31270	313 aa	Predicted RBP	13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	PBX3	P40426	434 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	HMGN5	P82970	282 aa	Known RBP	13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	PLCB3	Q01970	1234 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	CSPP1	Q1MSJ5	1256 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	PUS10	Q3MIT2	529 aa	Known RBP	13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	TWF2	Q6IBS0	349 aa	Known RBP	13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	KCNT2	Q6UVM3	1135 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	CATSPER4	Q7RTX7	472 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	FERMT3	Q86UX7	667 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	THNSL1	Q8IYQ7	743 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	ABI1	Q8IZP0	508 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	LRRC43	Q8N309	656 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	TCP11	Q8WWU5	503 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	LPP	Q93052	612 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	ANKEF1	Q9NU02	776 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	AGPAT5	Q9NUQ2	364 aa		13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	PIN4	Q9Y237	131 aa	Known RBP	13.81	□□□□□ -0.2
VEGFA-223	ENST00000523125	FSCN2	O14926	492 aa		13.8	□□□□□ -0.2
VEGFA-223	ENST00000523125	ASAP2	O43150	1006 aa		13.8	□□□□□ -0.2
VEGFA-223	ENST00000523125	GLP2R	O95838	553 aa		13.8	□□□□□ -0.2

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