RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 AKAP2Q9Y2D5 859 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 TET1Q8NFU7 2136 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 ZFHX2Q9C0A1 2572 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-210ENST00000522843 CACNA1HO95180 2353 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-210ENST00000522843 LCHNA4D1U4 455 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 EIF1AYO14602 144 aaKnown RBP8.03□□□□□ -1.12
SDCBP-210ENST00000522843 B4GALT4O60513 344 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 LEFTY1O75610 366 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 CEACAM5P06731 702 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 UQCRFS1P1P0C7P4 283 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 STAT3P40763 770 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 ACVR2BQ13705 512 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 KCTD2Q14681 263 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 CCDC144BQ3MJ40 725 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 LEXMQ3ZCV2 418 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 CXCL17Q6UXB2 119 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 GDPD5Q8WTR4 605 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 CCDC74AQ96AQ1 378 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 MEIS3Q99687 375 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 DUSP23Q9BVJ7 150 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 CABP5Q9NP86 173 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 DISC1Q9NRI5 854 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 PLAGL2Q9UPG8 496 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 RIPK3Q9Y572 518 aa8.03□□□□□ -1.12
SDCBP-210ENST00000522843 KRTAP9-7A8MTY7 169 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 VWA5AO00534 786 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 DCXO43602 365 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 RNGTTO60942 597 aaKnown RBP8.02□□□□□ -1.13
SDCBP-210ENST00000522843 ALADP13716 330 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 CYP7A1P22680 504 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 PSMC6P62333 389 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 ITGA7Q13683 1181 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 TMEM63BQ5T3F8 832 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 GORABQ5T7V8 394 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 TMCO2Q7Z6W1 182 aaPredicted RBP8.02□□□□□ -1.13
SDCBP-210ENST00000522843 ZSWIM9Q86XI8 627 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 RPUSD2Q8IZ73 545 aaKnown RBP8.02□□□□□ -1.13
SDCBP-210ENST00000522843 MSL3Q8N5Y2 521 aaKnown RBP8.02□□□□□ -1.13
SDCBP-210ENST00000522843 RBCK1Q9BYM8 510 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 VCPKMTQ9H867 229 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 ALG13Q9NP73 1137 aaKnown RBP8.02□□□□□ -1.13
SDCBP-210ENST00000522843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.02□□□□□ -1.13
SDCBP-210ENST00000522843 PCOLCE2Q9UKZ9 415 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 GNEQ9Y223 722 aaKnown RBP8.02□□□□□ -1.13
SDCBP-210ENST00000522843 TMX2Q9Y320 296 aa8.02□□□□□ -1.13
SDCBP-210ENST00000522843 MPHOSPH10O00566 681 aaKnown RBP8.01□□□□□ -1.13
SDCBP-210ENST00000522843 SRGAP3O43295 1099 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 CYP2D6P10635 497 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 AKR1B1P15121 316 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 KCNA5P22460 613 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 TCF15Q12870 199 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 MTX1Q13505 466 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 RPS26P11Q5JNZ5 115 aaPredicted RBP8.01□□□□□ -1.13
SDCBP-210ENST00000522843 DEFB128Q7Z7B8 93 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 TTC6Q86TZ1 520 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 CILP2Q8IUL8 1156 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 HERC6Q8IVU3 1022 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 RIOK1Q9BRS2 568 aaKnown RBP8.01□□□□□ -1.13
SDCBP-210ENST00000522843 DNAJC25Q9H1X3 360 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 TRMT13Q9NUP7 481 aaKnown RBP8.01□□□□□ -1.13
SDCBP-210ENST00000522843 SNX11Q9Y5W9 270 aa8.01□□□□□ -1.13
SDCBP-210ENST00000522843 PTPRZ1P23471 2315 aaPredicted RBP8.01□□□□□ -1.13
SDCBP-210ENST00000522843 NAV1Q8NEY1 1877 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 WDR46O15213 610 aaKnown RBP8□□□□□ -1.13
SDCBP-210ENST00000522843 ZNF862O60290 1169 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 BRD1O95696 1058 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 CYP2C9P11712 490 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 RAP1GAPP47736 663 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 HNRNPUQ00839 825 aaKnown RBP eCLIP8□□□□□ -1.13
SDCBP-210ENST00000522843 ZP2Q05996 745 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 MLANAQ16655 118 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 ARMCX2Q7L311 632 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 PHOSPHO2Q8TCD6 241 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 NEK9Q8TD19 979 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 EPS8L3Q8TE67 593 aaKnown RBP8□□□□□ -1.13
SDCBP-210ENST00000522843 DMRTB1Q96MA1 342 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 SLC9A7Q96T83 725 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 TNKS2Q9H2K2 1166 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 ABHD16BQ9H3Z7 469 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 LMCD1Q9NZU5 365 aa8□□□□□ -1.13
SDCBP-210ENST00000522843 DDX49Q9Y6V7 483 aaKnown RBP8□□□□□ -1.13
SDCBP-210ENST00000522843 PNMA6EA0A0J9YXQ4 647 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 ZNF503-AS2A6NEH8 195 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 H3BQ06 376 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-210ENST00000522843 GADD45BO75293 160 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-210ENST00000522843 PFKMP08237 780 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 ICA1Q05084 483 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 DNAH14Q0VDD8 3507 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 GPNMBQ14956 572 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 KCNMB1Q16558 191 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 TCTN1Q2MV58 587 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 TTC39AQ5SRH9 613 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 TMEM179Q6ZVK1 233 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 TMC7Q7Z402 723 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 CCDC144CPQ8IYA2 1237 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 MAGEB6Q8N7X4 407 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 ALKBH8Q96BT7 664 aaKnown RBP7.99□□□□□ -1.13
SDCBP-210ENST00000522843 DYNLL2Q96FJ2 89 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 ALDH8A1Q9H2A2 487 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms