RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 NME8Q8N427 588 aa17.98■□□□□ 0.47
LSM1-204ENST00000522515 IFT74Q96LB3 600 aa17.98■□□□□ 0.47
LSM1-204ENST00000522515 NLRP4Q96MN2 994 aa17.98■□□□□ 0.47
LSM1-204ENST00000522515 GSDMAQ96QA5 445 aa17.98■□□□□ 0.47
LSM1-204ENST00000522515 TBC1D7Q9P0N9 293 aa17.98■□□□□ 0.47
LSM1-204ENST00000522515 CCDC169A6NNP5 214 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 GPR32O75388 356 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 RHOBTB3O94955 611 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 THPOP40225 353 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 GPC3P51654 580 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 DMP1Q13316 513 aaPredicted RBP17.97■□□□□ 0.47
LSM1-204ENST00000522515 KCNB1Q14721 858 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 KIZQ2M2Z5 673 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 RSPH3Q86UC2 560 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 RNF149Q8NC42 400 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 FIZ1Q96SL8 496 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 NTPCRQ9BSD7 190 aaKnown RBP17.97■□□□□ 0.47
LSM1-204ENST00000522515 EXOC1Q9NV70 894 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 SEL1LQ9UBV2 794 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 MAN1B1Q9UKM7 699 aa17.97■□□□□ 0.47
LSM1-204ENST00000522515 LRRIQ4A6NIV6 560 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 BIN1O00499 593 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 CTSHP09668 335 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 NAMPTP43490 491 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 MRPS6P82932 125 aaKnown RBP17.96■□□□□ 0.47
LSM1-204ENST00000522515 PPP2R5AQ15172 486 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 ISM2Q6H9L7 571 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 SPIRE2Q8WWL2 714 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 KIFC3Q9BVG8 833 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 FGFBP2Q9BYJ0 223 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 ADAMTS10Q9H324 1103 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 CDHR5Q9HBB8 845 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 OLFML3Q9NRN5 406 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 ADGRA3Q8IWK6 1321 aa17.96■□□□□ 0.47
LSM1-204ENST00000522515 A0A087WZ62 844 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 RBAK-RBAKDNI3L0D1 243 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 SLC16A4O15374 487 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 RPLP2P05387 115 aaKnown RBP17.96■□□□□ 0.46
LSM1-204ENST00000522515 CKBP12277 381 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 NMT1P30419 496 aaKnown RBP17.96■□□□□ 0.46
LSM1-204ENST00000522515 STK4Q13043 487 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 FAM26FQ5R3K3 315 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 FAM178BQ8IXR5 827 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 GLIS3Q8NEA6 775 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 NLRP7Q8WX94 980 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 CCDC47Q96A33 483 aaKnown RBP17.96■□□□□ 0.46
LSM1-204ENST00000522515 FDXACB1Q9BRP7 624 aaPredicted RBP17.96■□□□□ 0.46
LSM1-204ENST00000522515 IFT122Q9HBG6 1241 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 KMT5AQ9NQR1 393 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 RMND1Q9NWS8 449 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 GINS2Q9Y248 185 aa17.96■□□□□ 0.46
LSM1-204ENST00000522515 CHRNA1P02708 482 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 SMTNP53814 917 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 NCKAP1LP55160 1127 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 CDC42EP1Q00587 391 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 TFDP1Q14186 410 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 ZNF618Q5T7W0 954 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 ZNF410Q86VK4 478 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 CAGE1Q8TC20 777 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 SCLT1Q96NL6 688 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 CELF4Q9BZC1 486 aaKnown RBP17.95■□□□□ 0.46
LSM1-204ENST00000522515 MRPL44Q9H9J2 332 aaKnown RBP17.95■□□□□ 0.46
LSM1-204ENST00000522515 SLC39A2Q9NP94 309 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 CDY2AQ9Y6F7 541 aa17.95■□□□□ 0.46
LSM1-204ENST00000522515 ALPK3Q96L96 1907 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 K7ENM7 598 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 CLTBP09497 229 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 BMP6P22004 513 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 CASP5P51878 434 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 PTENP60484 403 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 POU5F1BQ06416 359 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 RBL2Q08999 1139 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 MGAT3Q09327 533 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 PSMD2Q13200 908 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 MORC3Q14149 939 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 TRAF7Q6Q0C0 670 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 ZNF720Q7Z2F6 126 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 HAUS6Q7Z4H7 955 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 KIAA0895Q8NCT3 520 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 TMEM161BQ8NDZ6 487 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 DEPTORQ8TB45 409 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 OSMRQ99650 979 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 NOC4LQ9BVI4 516 aaKnown RBP17.94■□□□□ 0.46
LSM1-204ENST00000522515 MINDY3Q9H8M7 445 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 ARHGAP28Q9P2N2 729 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 KCNG1Q9UIX4 513 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 TBX21Q9UL17 535 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 GDAQ9Y2T3 454 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 TRPV2Q9Y5S1 764 aa17.94■□□□□ 0.46
LSM1-204ENST00000522515 UMODL1Q5DID0 1318 aa17.93■□□□□ 0.46
LSM1-204ENST00000522515 M0QZ92 97 aa17.93■□□□□ 0.46
LSM1-204ENST00000522515 CAND2O75155 1236 aa17.93■□□□□ 0.46
LSM1-204ENST00000522515 CSDE1O75534 798 aaKnown RBP17.93■□□□□ 0.46
LSM1-204ENST00000522515 MYBP10242 640 aa17.93■□□□□ 0.46
LSM1-204ENST00000522515 MAPTP10636 758 aaKnown RBP17.93■□□□□ 0.46
LSM1-204ENST00000522515 PHKA2P46019 1235 aa17.93■□□□□ 0.46
LSM1-204ENST00000522515 CRYBB1P53674 252 aaPredicted RBP17.93■□□□□ 0.46
LSM1-204ENST00000522515 BFSP2Q13515 415 aa17.93■□□□□ 0.46
LSM1-204ENST00000522515 ZC2HC1CQ53FD0 456 aaPredicted RBP17.93■□□□□ 0.46
LSM1-204ENST00000522515 FAM26DQ5JW98 314 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms