RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 FAM87AP0C7U9 286 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 RHCEP18577 417 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 AMY2BP19961 511 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 MAP4P27816 1152 aaKnown RBP8.66□□□□□ -1.02
SPIDR-215ENST00000521798 TMPOP42166 694 aaKnown RBP8.66□□□□□ -1.02
SPIDR-215ENST00000521798 JAM2P57087 298 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 RHDQ02161 417 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 PDCD1Q15116 288 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 GPR19Q15760 415 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 ZNF790Q6PG37 636 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 LINC00114Q6XXX2 140 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 OSTM1Q86WC4 334 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 MFSD4AQ8N468 514 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 SSH1Q8WYL5 1049 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 JADE3Q92613 823 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 CHAMP1Q96JM3 812 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 UBL7Q96S82 380 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-215ENST00000521798 KCNJ15Q99712 375 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-215ENST00000521798 RNF38Q9H0F5 515 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 CSRNP2Q9H175 543 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 PCIF1Q9H4Z3 704 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 ZMAT4Q9H898 229 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 PLCB1Q9NQ66 1216 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 GTF2IRD1Q9UHL9 959 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 QSER1Q2KHR3 1735 aa8.66□□□□□ -1.02
SPIDR-215ENST00000521798 CICQ96RK0 1608 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 DLG5Q8TDM6 1919 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 FAM95CA0A1B0GW59 222 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 BTBD11A6QL63 1104 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 IGF2BP3O00425 579 aaKnown RBP eCLIP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 KCNQ3O43525 872 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 KDM1AO60341 852 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 ZBTB7AO95365 584 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 HMGB2P26583 209 aaKnown RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 RIPK4P57078 832 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 PCBP3P57721 371 aaKnown RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 RPL11P62913 178 aaKnown RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 ZNF267Q14586 743 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 SPTY2D1Q68D10 685 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 TTLL7Q6ZT98 887 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 FRMD7Q6ZUT3 714 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 SMIM5Q71RC9 77 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 SRGAP1Q7Z6B7 1085 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 COL23A1Q86Y22 540 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 CPNE8Q86YQ8 564 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 NOSTRINQ8IVI9 506 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 MYRIPQ8NFW9 859 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 ACAP3Q96P50 834 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 NAP1L4Q99733 375 aaKnown RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 THUMPD2Q9BTF0 503 aaKnown RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 IRX2Q9BZI1 471 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 DUSP15Q9H1R2 295 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 CLDND1Q9NY35 253 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 RRP7AQ9Y3A4 280 aaKnown RBP8.65□□□□□ -1.02
SPIDR-215ENST00000521798 UBR2Q8IWV8 1755 aa8.65□□□□□ -1.02
SPIDR-215ENST00000521798 COL5A3P25940 1745 aaPredicted RBP8.65□□□□□ -1.03
SPIDR-215ENST00000521798 TJP1Q07157 1748 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 KLRG2A4D1S0 409 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-215ENST00000521798 A6NNZ2 444 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 TPP1O14773 563 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 GNB5O14775 395 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 TBX3O15119 743 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 KRT15P19012 456 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 BCL6P41182 706 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 TRAPPC10P48553 1259 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 PRRT3Q5FWE3 981 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 ATAT1Q5SQI0 421 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 ANGEL2Q5VTE6 544 aaKnown RBP8.64□□□□□ -1.03
SPIDR-215ENST00000521798 FSTL4Q6MZW2 842 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 DNAJC10Q8IXB1 793 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 TTC5Q8N0Z6 440 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 SLC16A10Q8TF71 515 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 IRF7Q92985 503 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 ZNF496Q96IT1 587 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-215ENST00000521798 TNIP3Q96KP6 325 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 HEXIM2Q96MH2 286 aaKnown RBP8.64□□□□□ -1.03
SPIDR-215ENST00000521798 FAM193BQ96PV7 902 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-215ENST00000521798 TRIT1Q9H3H1 467 aaKnown RBP8.64□□□□□ -1.03
SPIDR-215ENST00000521798 SPON1Q9HCB6 807 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 NLRC4Q9NPP4 1024 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 AP5S1Q9NUS5 200 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 ADGRE2Q9UHX3 823 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 TCFL5Q9UL49 500 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 UBR3Q6ZT12 1888 aa8.64□□□□□ -1.03
SPIDR-215ENST00000521798 MYH14Q7Z406 1995 aaKnown RBP8.63□□□□□ -1.03
SPIDR-215ENST00000521798 C7orf72A4D263 438 aa8.63□□□□□ -1.03
SPIDR-215ENST00000521798 H7BY64 318 aa8.63□□□□□ -1.03
SPIDR-215ENST00000521798 LCE2BO14633 110 aa8.63□□□□□ -1.03
SPIDR-215ENST00000521798 TERTO14746 1132 aaKnown RBP8.63□□□□□ -1.03
SPIDR-215ENST00000521798 ZBED1O96006 694 aa8.63□□□□□ -1.03
SPIDR-215ENST00000521798 CYP19A1P11511 503 aaPredicted RBP8.63□□□□□ -1.03
SPIDR-215ENST00000521798 BMP3P12645 472 aa8.63□□□□□ -1.03
SPIDR-215ENST00000521798 ENDOUP21128 410 aaKnown RBP8.63□□□□□ -1.03
SPIDR-215ENST00000521798 CD40P25942 277 aa8.63□□□□□ -1.03
SPIDR-215ENST00000521798 CRKLP46109 303 aaKnown RBP8.63□□□□□ -1.03
SPIDR-215ENST00000521798 KIF11P52732 1056 aa8.63□□□□□ -1.03
SPIDR-215ENST00000521798 ADKP55263 362 aaKnown RBP8.63□□□□□ -1.03
SPIDR-215ENST00000521798 LAPTM5Q13571 262 aa8.63□□□□□ -1.03
SPIDR-215ENST00000521798 KRT72Q14CN4 511 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms