RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 Q3C1V9 767 aa20.19■□□□□ 0.82
TRAPPC9-210ENST00000521667 TMEM161BQ8NDZ6 487 aa20.19■□□□□ 0.82
TRAPPC9-210ENST00000521667 SPIRE2Q8WWL2 714 aa20.19■□□□□ 0.82
TRAPPC9-210ENST00000521667 IFIH1Q9BYX4 1025 aaKnown RBP20.19■□□□□ 0.82
TRAPPC9-210ENST00000521667 ZNF302Q9NR11 478 aa20.19■□□□□ 0.82
TRAPPC9-210ENST00000521667 EXOC7Q9UPT5 735 aa20.19■□□□□ 0.82
TRAPPC9-210ENST00000521667 PCDHA13Q9Y5I0 950 aa20.19■□□□□ 0.82
TRAPPC9-210ENST00000521667 MAFBQ9Y5Q3 323 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC9-210ENST00000521667 TISP43B9A030 160 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 KIF5AQ12840 1032 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 BFSP1Q12934 665 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 SLC10A4Q96EP9 437 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 MPHOSPH6Q99547 160 aaKnown RBP20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 CBWD1Q9BRT8 395 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 NTPCRQ9BSD7 190 aaKnown RBP20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 PCIF1Q9H4Z3 704 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 ATP6V0A4Q9HBG4 840 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 SIX2Q9NPC8 291 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 KMT5AQ9NQR1 393 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 MYO6Q9UM54 1294 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 TBX20Q9UMR3 447 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 FHOD1Q9Y613 1164 aa20.18■□□□□ 0.82
TRAPPC9-210ENST00000521667 RTP1P59025 263 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 TUBB2AQ13885 445 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 ASIC2Q16515 512 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 BSNDQ8WZ55 320 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 SPAG5Q96R06 1193 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 TUBB2BQ9BVA1 445 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 XPNPEP1Q9NQW7 623 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 FARP2O94887 1054 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 TRIM49P0CI25 452 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 TRIM49CP0CI26 452 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 TGFB3P10600 412 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 KRT13P13646 458 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 NEDD9Q14511 834 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 KCTD2Q14681 263 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 INTS8Q75QN2 995 aaKnown RBP20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 MAP4K3Q8IVH8 894 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 XXYLT1Q8NBI6 393 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 RDH13Q8NBN7 331 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 HSPBP1Q9NZL4 362 aa20.17■□□□□ 0.82
TRAPPC9-210ENST00000521667 IGKV6D-21A0A0A0MT36 114 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 UNCXA6NJT0 531 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 RBAK-RBAKDNI3L0D1 243 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 OATP04181 439 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 PGK2P07205 417 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 ATP4AP20648 1035 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 SOX10P56693 466 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 KLHL30Q0D2K2 578 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 ELF2Q15723 593 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 MTERF2Q49AM1 385 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 MTERF4Q7Z6M4 381 aaKnown RBP20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 MMP19Q99542 508 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 KIFC3Q9BVG8 833 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 MROH8Q9H579 483 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 CDC23Q9UJX2 597 aa20.16■□□□□ 0.82
TRAPPC9-210ENST00000521667 DENND3A2RUS2 1198 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 MAPK13O15264 365 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 GFPT1Q06210 699 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 CBWD6Q4V339 395 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 CBWD3Q5JTY5 395 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 CBWD5Q5RIA9 395 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 FGD4Q96M96 766 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 DOCK5Q9H7D0 1870 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 DNAJC25-GNG10A0A024R161 153 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 GSTTP1A0A1W2PQM5 241 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 EFCAB8A8MWE9 144 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 TADA3O75528 432 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 MAGEA1P43355 309 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 ARID5AQ03989 594 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 ERCC6LQ2NKX8 1250 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 TXLNBQ8N3L3 684 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 PNMA3Q9UL41 463 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 DUSP10Q9Y6W6 482 aa20.15■□□□□ 0.82
TRAPPC9-210ENST00000521667 ERVK-9P63128 1117 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 MYL7Q01449 175 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 EEPD1Q7L9B9 569 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 SECISBP2LQ93073 1101 aaKnown RBP20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 IFT74Q96LB3 600 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 MAP7D2Q96T17 732 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 POLR3FQ9H1D9 316 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 VAMP7P51809 220 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 POLGP54098 1239 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 JAM2P57087 298 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 EMC2Q15006 297 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 IQCEQ6IPM2 695 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 METTL7BQ6UX53 244 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 IRF2BP2Q7Z5L9 587 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 SHCBP1Q8NEM2 672 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 GTF3C2Q8WUA4 911 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 UBXN4Q92575 508 aa20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 AJAP1Q9UKB5 411 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 BZW2Q9Y6E2 419 aaKnown RBP20.14■□□□□ 0.81
TRAPPC9-210ENST00000521667 ARID2Q68CP9 1835 aa20.13■□□□□ 0.81
TRAPPC9-210ENST00000521667 MACROD2A1Z1Q3 448 aa20.13■□□□□ 0.81
TRAPPC9-210ENST00000521667 ANKRD63C9JTQ0 380 aa20.13■□□□□ 0.81
TRAPPC9-210ENST00000521667 PJA2O43164 708 aa20.13■□□□□ 0.81
TRAPPC9-210ENST00000521667 GGPS1O95749 300 aa20.13■□□□□ 0.81
TRAPPC9-210ENST00000521667 CNGA1P29973 690 aa20.13■□□□□ 0.81
TRAPPC9-210ENST00000521667 MKRN3Q13064 507 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms