RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 VPS52Q8N1B4 723 aa18.54■□□□□ 0.56
TRAM1-204ENST00000521049 REXO1Q8N1G1 1221 aaKnown RBP18.54■□□□□ 0.56
TRAM1-204ENST00000521049 TDRD5Q8NAT2 981 aaKnown RBP18.54■□□□□ 0.56
TRAM1-204ENST00000521049 TMEM87AQ8NBN3 555 aa18.54■□□□□ 0.56
TRAM1-204ENST00000521049 TCEANC2Q96MN5 208 aa18.54■□□□□ 0.56
TRAM1-204ENST00000521049 DISC1Q9NRI5 854 aa18.54■□□□□ 0.56
TRAM1-204ENST00000521049 ADAMTS3O15072 1205 aa18.53■□□□□ 0.56
TRAM1-204ENST00000521049 CTSAP10619 480 aa18.53■□□□□ 0.56
TRAM1-204ENST00000521049 DDX53Q86TM3 631 aaKnown RBP18.53■□□□□ 0.56
TRAM1-204ENST00000521049 C12orf76Q8N812 135 aaPredicted RBP18.53■□□□□ 0.56
TRAM1-204ENST00000521049 SLC22A17Q8WUG5 538 aa18.53■□□□□ 0.56
TRAM1-204ENST00000521049 LENG9Q96B70 501 aa18.53■□□□□ 0.56
TRAM1-204ENST00000521049 ZNF668Q96K58 619 aaPredicted RBP18.53■□□□□ 0.56
TRAM1-204ENST00000521049 SCLT1Q96NL6 688 aa18.53■□□□□ 0.56
TRAM1-204ENST00000521049 RIT2Q99578 217 aa18.53■□□□□ 0.56
TRAM1-204ENST00000521049 GCOM2Q9BZD3 368 aaPredicted RBP18.53■□□□□ 0.56
TRAM1-204ENST00000521049 ZBP1Q9H171 429 aa18.53■□□□□ 0.56
TRAM1-204ENST00000521049 DBR1Q9UK59 544 aaKnown RBP18.53■□□□□ 0.56
TRAM1-204ENST00000521049 PRR23AA6NEV1 266 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 ASGR2P07307 311 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 WEE2P0C1S8 567 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 SKIP12755 728 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 FGFR4P22455 802 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 CA8P35219 290 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 PHKA2P46019 1235 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 TBC1D8BQ0IIM8 1120 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 TARBP2Q15633 366 aaKnown RBP18.52■□□□□ 0.56
TRAM1-204ENST00000521049 NLRP7Q8WX94 980 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 IGSF21Q96ID5 467 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 MFSD1Q9H3U5 465 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 SMOC2Q9H3U7 446 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 CYP26B1Q9NR63 512 aa18.52■□□□□ 0.56
TRAM1-204ENST00000521049 EVPLQ92817 2033 aa18.51■□□□□ 0.55
TRAM1-204ENST00000521049 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.51■□□□□ 0.55
TRAM1-204ENST00000521049 PRPF3O43395 683 aaKnown RBP18.51■□□□□ 0.55
TRAM1-204ENST00000521049 HMGB1P09429 215 aaKnown RBP18.51■□□□□ 0.55
TRAM1-204ENST00000521049 EPCAMP16422 314 aa18.51■□□□□ 0.55
TRAM1-204ENST00000521049 SFNP31947 248 aa18.51■□□□□ 0.55
TRAM1-204ENST00000521049 PRKCEQ02156 737 aa18.51■□□□□ 0.55
TRAM1-204ENST00000521049 KRT32Q14532 448 aa18.51■□□□□ 0.55
TRAM1-204ENST00000521049 ADCK5Q3MIX3 580 aa18.51■□□□□ 0.55
TRAM1-204ENST00000521049 PPFIBP1Q86W92 1011 aa18.51■□□□□ 0.55
TRAM1-204ENST00000521049 RASEFQ8IZ41 740 aa18.51■□□□□ 0.55
TRAM1-204ENST00000521049 BICD2Q8TD16 824 aa18.51■□□□□ 0.55
TRAM1-204ENST00000521049 YTHDC1Q96MU7 727 aaKnown RBP18.51■□□□□ 0.55
TRAM1-204ENST00000521049 NIFKQ9BYG3 293 aaKnown RBP18.51■□□□□ 0.55
TRAM1-204ENST00000521049 INO80BQ9C086 356 aaPredicted RBP18.51■□□□□ 0.55
TRAM1-204ENST00000521049 CFAP54Q96N23 3096 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 MSH4O15457 936 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 ZNF623O75123 536 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 ZC3H11AO75152 810 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRAM1-204ENST00000521049 CSDE1O75534 798 aaKnown RBP18.5■□□□□ 0.55
TRAM1-204ENST00000521049 GALTP07902 379 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 USP11P51784 963 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 JAK3P52333 1124 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 KANK3Q6NY19 840 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 CABP7Q86V35 215 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 AUTS2Q8WXX7 1259 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 ACSF2Q96CM8 615 aaPredicted RBP18.5■□□□□ 0.55
TRAM1-204ENST00000521049 NRDE2Q9H7Z3 1164 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 STK39Q9UEW8 545 aa18.5■□□□□ 0.55
TRAM1-204ENST00000521049 PTPRZ1P23471 2315 aaPredicted RBP18.49■□□□□ 0.55
TRAM1-204ENST00000521049 IGKV6-21A0A0C4DH24 114 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 EDIL3O43854 480 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 DNM2P50570 870 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 UGCGQ16739 394 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 NOMO2Q5JPE7 1267 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 GLB1LQ6UWU2 654 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 OTOP3Q7RTS5 596 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 GPR149Q86SP6 731 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 TMEM173Q86WV6 379 aaPredicted RBP18.49■□□□□ 0.55
TRAM1-204ENST00000521049 RDM1Q8NG50 284 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 SLC5A5Q92911 643 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 NKD2Q969F2 451 aaPredicted RBP18.49■□□□□ 0.55
TRAM1-204ENST00000521049 CCDC136Q96JN2 1154 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 TBC1D13Q9NVG8 400 aa18.49■□□□□ 0.55
TRAM1-204ENST00000521049 NAP1L2Q9ULW6 460 aaPredicted RBP18.49■□□□□ 0.55
TRAM1-204ENST00000521049 GAS7O60861 476 aa18.48■□□□□ 0.55
TRAM1-204ENST00000521049 OFD1O75665 1012 aa18.48■□□□□ 0.55
TRAM1-204ENST00000521049 SFPQP23246 707 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRAM1-204ENST00000521049 FGD1P98174 961 aa18.48■□□□□ 0.55
TRAM1-204ENST00000521049 DRP2Q13474 957 aa18.48■□□□□ 0.55
TRAM1-204ENST00000521049 XKR3Q5GH77 459 aa18.48■□□□□ 0.55
TRAM1-204ENST00000521049 TWF2Q6IBS0 349 aaKnown RBP18.48■□□□□ 0.55
TRAM1-204ENST00000521049 TMC5Q6UXY8 1006 aa18.48■□□□□ 0.55
TRAM1-204ENST00000521049 ZNF410Q86VK4 478 aa18.48■□□□□ 0.55
TRAM1-204ENST00000521049 CEP89Q96ST8 783 aa18.48■□□□□ 0.55
TRAM1-204ENST00000521049 TEKT3Q9BXF9 490 aa18.48■□□□□ 0.55
TRAM1-204ENST00000521049 SFXN1Q9H9B4 322 aa18.48■□□□□ 0.55
TRAM1-204ENST00000521049 A0A087WZ62 844 aa18.47■□□□□ 0.55
TRAM1-204ENST00000521049 STBD1O95210 358 aa18.47■□□□□ 0.55
TRAM1-204ENST00000521049 RAB27AP51159 221 aa18.47■□□□□ 0.55
TRAM1-204ENST00000521049 AKAP17AQ02040 695 aaKnown RBP18.47■□□□□ 0.55
TRAM1-204ENST00000521049 TDGQ13569 410 aa18.47■□□□□ 0.55
TRAM1-204ENST00000521049 LRCH2Q5VUJ6 765 aa18.47■□□□□ 0.55
TRAM1-204ENST00000521049 LPPQ93052 612 aa18.47■□□□□ 0.55
TRAM1-204ENST00000521049 FDXACB1Q9BRP7 624 aaPredicted RBP18.47■□□□□ 0.55
TRAM1-204ENST00000521049 EMILIN2Q9BXX0 1053 aa18.47■□□□□ 0.55
TRAM1-204ENST00000521049 UNC45AQ9H3U1 944 aa18.47■□□□□ 0.55
TRAM1-204ENST00000521049 FAM105AQ9NUU6 356 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms