RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 FSD2A1L4K1 749 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 GRXCR2A6NFK2 248 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 BTBD18B2RXH4 712 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 TBX10O75333 385 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 YWHABP31946 246 aaKnown RBP12.01□□□□□ -0.49
PVT1-209ENST00000520913 PPM1AP35813 382 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 NPEPPSP55786 919 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 CYP4A11Q02928 519 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 SAFBQ15424 915 aaKnown RBP eCLIP12.01□□□□□ -0.49
PVT1-209ENST00000520913 CALCRLQ16602 461 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 OTUD6AQ7L8S5 288 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 FAM178BQ8IXR5 827 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 RNF169Q8NCN4 708 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 PSPC1Q8WXF1 523 aaKnown RBP12.01□□□□□ -0.49
PVT1-209ENST00000520913 DYDC2Q96IM9 177 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 CASD1Q96PB1 797 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 MRPL9Q9BYD2 267 aaKnown RBP12.01□□□□□ -0.49
PVT1-209ENST00000520913 DHX33Q9H6R0 707 aaKnown RBP12.01□□□□□ -0.49
PVT1-209ENST00000520913 CWH43Q9H720 699 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 ZSWIM4Q9H7M6 989 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 TLR9Q9NR96 1032 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 CHST12Q9NRB3 414 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 RNF19AQ9NV58 838 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 TYW1Q9NV66 732 aaKnown RBP12.01□□□□□ -0.49
PVT1-209ENST00000520913 LIMCH1Q9UPQ0 1083 aa12.01□□□□□ -0.49
PVT1-209ENST00000520913 PIN4Q9Y237 131 aaKnown RBP12.01□□□□□ -0.49
PVT1-209ENST00000520913 MYH11P35749 1972 aa12□□□□□ -0.49
PVT1-209ENST00000520913 CSDE1O75534 798 aaKnown RBP12□□□□□ -0.49
PVT1-209ENST00000520913 FGF18O76093 207 aa12□□□□□ -0.49
PVT1-209ENST00000520913 EOMESO95936 686 aa12□□□□□ -0.49
PVT1-209ENST00000520913 SKIP12755 728 aa12□□□□□ -0.49
PVT1-209ENST00000520913 ATF7P17544 494 aaPredicted RBP12□□□□□ -0.49
PVT1-209ENST00000520913 IRS1P35568 1242 aa12□□□□□ -0.49
PVT1-209ENST00000520913 LTBRP36941 435 aa12□□□□□ -0.49
PVT1-209ENST00000520913 NDUFV1P49821 464 aa12□□□□□ -0.49
PVT1-209ENST00000520913 RAB27AP51159 221 aa12□□□□□ -0.49
PVT1-209ENST00000520913 EMC2Q15006 297 aa12□□□□□ -0.49
PVT1-209ENST00000520913 CLLU1OSQ5K130 101 aa12□□□□□ -0.49
PVT1-209ENST00000520913 TWF2Q6IBS0 349 aaKnown RBP12□□□□□ -0.49
PVT1-209ENST00000520913 CATSPER4Q7RTX7 472 aa12□□□□□ -0.49
PVT1-209ENST00000520913 ADGRD2Q7Z7M1 963 aa12□□□□□ -0.49
PVT1-209ENST00000520913 ZNF598Q86UK7 904 aaKnown RBP12□□□□□ -0.49
PVT1-209ENST00000520913 CCDC83Q8IWF9 413 aa12□□□□□ -0.49
PVT1-209ENST00000520913 HELQQ8TDG4 1101 aa12□□□□□ -0.49
PVT1-209ENST00000520913 TCP11Q8WWU5 503 aa12□□□□□ -0.49
PVT1-209ENST00000520913 CCDC43Q96MW1 224 aaKnown RBP12□□□□□ -0.49
PVT1-209ENST00000520913 ZNF558Q96NG5 402 aa12□□□□□ -0.49
PVT1-209ENST00000520913 MTRQ99707 1265 aa12□□□□□ -0.49
PVT1-209ENST00000520913 LLPHQ9BRT6 129 aaKnown RBP12□□□□□ -0.49
PVT1-209ENST00000520913 TRAIPQ9BWF2 469 aa12□□□□□ -0.49
PVT1-209ENST00000520913 C1QTNF1Q9BXJ1 281 aa12□□□□□ -0.49
PVT1-209ENST00000520913 RGL1Q9NZL6 768 aa12□□□□□ -0.49
PVT1-209ENST00000520913 PCDHA12Q9UN75 941 aa12□□□□□ -0.49
PVT1-209ENST00000520913 LZTS1Q9Y250 596 aa12□□□□□ -0.49
PVT1-209ENST00000520913 DENND4AQ7Z401 1863 aa12□□□□□ -0.49
PVT1-209ENST00000520913 LINC01565O15544 149 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 GTF2F1P35269 517 aaKnown RBP eCLIP11.99□□□□□ -0.493e-6■■□□□ 13.2
PVT1-209ENST00000520913 PHKA2P46019 1235 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 NRIP1P48552 1158 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 HMGN5P82970 282 aaKnown RBP11.99□□□□□ -0.49
PVT1-209ENST00000520913 PLCB3Q01970 1234 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 CTTNQ14247 550 aaKnown RBP11.99□□□□□ -0.49
PVT1-209ENST00000520913 C8orf34Q49A92 452 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 XKR9Q5GH70 373 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 PDE12Q6L8Q7 609 aaKnown RBP11.99□□□□□ -0.49
PVT1-209ENST00000520913 KCNT2Q6UVM3 1135 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 KSR1Q8IVT5 923 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 EFHBQ8N7U6 833 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 ZNF579Q8NAF0 562 aaKnown RBP11.99□□□□□ -0.49
PVT1-209ENST00000520913 MRPS27Q92552 414 aaKnown RBP11.99□□□□□ -0.49
PVT1-209ENST00000520913 C8orf76Q96K31 380 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 ZSCAN31Q96LW9 406 aaPredicted RBP11.99□□□□□ -0.49
PVT1-209ENST00000520913 EIF2AK1Q9BQI3 630 aaKnown RBP11.99□□□□□ -0.49
PVT1-209ENST00000520913 IGFLR1Q9H665 355 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 TTC12Q9H892 705 aaPredicted RBP11.99□□□□□ -0.49
PVT1-209ENST00000520913 SH2B1Q9NRF2 756 aaPredicted RBP11.99□□□□□ -0.49
PVT1-209ENST00000520913 BMP2KQ9NSY1 1161 aaPredicted RBP11.99□□□□□ -0.49
PVT1-209ENST00000520913 AGPAT5Q9NUQ2 364 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 PRKAG3Q9UGI9 489 aa11.99□□□□□ -0.49
PVT1-209ENST00000520913 CARNS1A5YM72 827 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 WNT7AO00755 349 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 ASAP2O43150 1006 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 MBTPS2O43462 519 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 LYPLA2O95372 231 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 SSTR3P32745 418 aaPredicted RBP11.98□□□□□ -0.49
PVT1-209ENST00000520913 GUCY1B3Q02153 619 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 DLX2Q07687 328 aaPredicted RBP11.98□□□□□ -0.49
PVT1-209ENST00000520913 LAMTOR4Q0VGL1 99 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 ORC2Q13416 577 aaPredicted RBP11.98□□□□□ -0.49
PVT1-209ENST00000520913 ADAM15Q13444 863 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 SMAD4Q13485 552 aaKnown RBP11.98□□□□□ -0.49
PVT1-209ENST00000520913 SMAD2Q15796 467 aaKnown RBP11.98□□□□□ -0.49
PVT1-209ENST00000520913 CLUL1Q15846 466 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 LRRC55Q6ZSA7 311 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 SRGAP1Q7Z6B7 1085 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 TPH2Q8IWU9 490 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 GJD3Q8N144 294 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 PRPF31Q8WWY3 499 aaKnown RBP11.98□□□□□ -0.49
PVT1-209ENST00000520913 TMEM143Q96AN5 459 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 MTMR9Q96QG7 549 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms