RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 POU3F3P20264 500 aaPredicted RBP5.54□□□□□ -1.52
SQLE-204ENST00000520493 ACO1P21399 889 aaKnown RBP5.54□□□□□ -1.52
SQLE-204ENST00000520493 NEK4P51957 841 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 TGFB2P61812 414 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 EXOSC10Q01780 885 aaKnown RBP5.54□□□□□ -1.52
SQLE-204ENST00000520493 ADCY1Q08828 1119 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 R3HDM1Q15032 1099 aaKnown RBP5.54□□□□□ -1.52
SQLE-204ENST00000520493 TBR1Q16650 682 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 C21orf62-AS1Q17RA5 79 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 PLEKHG6Q3KR16 790 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 PRAMEF9Q5VWM5 478 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 TIGD7Q6NT04 549 aaPredicted RBP5.54□□□□□ -1.52
SQLE-204ENST00000520493 DDX46Q7L014 1031 aaKnown RBP5.54□□□□□ -1.52
SQLE-204ENST00000520493 AFAP1L2Q8N4X5 818 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 C7orf31Q8N865 590 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 PRPF38AQ8NAV1 312 aaKnown RBP5.54□□□□□ -1.52
SQLE-204ENST00000520493 STAG1Q8WVM7 1258 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 GCDHQ92947 438 aaPredicted RBP5.54□□□□□ -1.52
SQLE-204ENST00000520493 ORAI3Q9BRQ5 295 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 KCMF1Q9P0J7 381 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 DENND2AQ9ULE3 1009 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 PMS2P1A4D2B8 440 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 MATN2O00339 956 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 SDSP20132 328 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 RGS3P49796 1198 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 BCAR1P56945 870 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 EPHA7Q15375 998 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 DHCR24Q15392 516 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 CCDC181Q5TID7 509 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 KIF18BQ86Y91 864 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 PASD1Q8IV76 773 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 ZZZ3Q8IYH5 903 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 SHCBP1Q8NEM2 672 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 OR5AN1Q8NGI8 311 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 CFHR4Q92496 578 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 CEP89Q96ST8 783 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 TARS2Q9BW92 718 aaKnown RBP5.53□□□□□ -1.52
SQLE-204ENST00000520493 SYNPO2Q9UMS6 1093 aa5.53□□□□□ -1.52
SQLE-204ENST00000520493 DVL2O14641 736 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 MSX2P35548 267 aaPredicted RBP5.52□□□□□ -1.53
SQLE-204ENST00000520493 HGFACQ04756 655 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 ADAM15Q13444 863 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 FHL2Q14192 279 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 GRM7Q14831 915 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 SART3Q15020 963 aaKnown RBP5.52□□□□□ -1.53
SQLE-204ENST00000520493 NRN1LQ496H8 165 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 ADGRE4PQ86SQ3 457 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 DDX42Q86XP3 938 aaKnown RBP eCLIP5.52□□□□□ -1.53
SQLE-204ENST00000520493 PHYKPLQ8IUZ5 450 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 SLC7A6OSQ96CW6 309 aaPredicted RBP5.52□□□□□ -1.53
SQLE-204ENST00000520493 PCGF6Q9BYE7 350 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 TOMM22Q9NS69 142 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 PLA2G3Q9NZ20 509 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 CTDP1Q9Y5B0 961 aaPredicted RBP5.52□□□□□ -1.53
SQLE-204ENST00000520493 SPO11Q9Y5K1 396 aa5.52□□□□□ -1.53
SQLE-204ENST00000520493 A0A1W2PRX2 142 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 FAM83GA6ND36 823 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 GOLGA8BA8MQT2 603 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 CYP27B1O15528 508 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 BRINP1O60477 761 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 EYA4O95677 639 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 S100BP04271 92 aaPredicted RBP5.51□□□□□ -1.53
SQLE-204ENST00000520493 SLC9A1P19634 815 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 INHBEP58166 350 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 DUSP8Q13202 625 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 NOL8Q76FK4 1167 aaKnown RBP5.51□□□□□ -1.53
SQLE-204ENST00000520493 NECAB2Q7Z6G3 386 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 RABGGTAQ92696 567 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 DYDC2Q96IM9 177 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 C16orf92Q96LL3 132 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 ZNF341Q9BYN7 854 aa5.51□□□□□ -1.53
SQLE-204ENST00000520493 POLR3BQ9NW08 1133 aaPredicted RBP5.51□□□□□ -1.53
SQLE-204ENST00000520493 DAPK3O43293 454 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 KPNA6O60684 536 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 APOL3O95236 402 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 PTX3P26022 381 aaPredicted RBP5.5□□□□□ -1.53
SQLE-204ENST00000520493 RIN1Q13671 783 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 USP39Q53GS9 565 aaKnown RBP5.5□□□□□ -1.53
SQLE-204ENST00000520493 CNNM4Q6P4Q7 775 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 RNF207Q6ZRF8 634 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 BMP8AQ7Z5Y6 402 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 SGMS1Q86VZ5 419 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 D2HGDHQ8N465 521 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 WDR92Q96MX6 357 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 ELF4Q99607 663 aaPredicted RBP5.5□□□□□ -1.53
SQLE-204ENST00000520493 SLC6A15Q9H2J7 730 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 AURKAIP1Q9NWT8 199 aaPredicted RBP5.5□□□□□ -1.53
SQLE-204ENST00000520493 OXSMQ9NWU1 459 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 KLHL42Q9P2K6 505 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 MAGEL2Q9UJ55 1249 aa5.5□□□□□ -1.53
SQLE-204ENST00000520493 RBM8AQ9Y5S9 174 aaKnown RBP5.5□□□□□ -1.53
SQLE-204ENST00000520493 CAPN14A8MX76 684 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 ZEB2O60315 1214 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 CD40P25942 277 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 HIBADHP31937 336 aaKnown RBP5.49□□□□□ -1.53
SQLE-204ENST00000520493 CDKN1CP49918 316 aaPredicted RBP5.49□□□□□ -1.53
SQLE-204ENST00000520493 ATP2C1P98194 919 aaPredicted RBP5.49□□□□□ -1.53
SQLE-204ENST00000520493 OCRLQ01968 901 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 ADCY2Q08462 1091 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 FOXL1Q12952 345 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms