RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 FAAP100Q0VG06 881 aa19.67■□□□□ 0.74
SDC2-205ENST00000520233 DMP1Q13316 513 aaPredicted RBP19.67■□□□□ 0.74
SDC2-205ENST00000520233 TFDP1Q14186 410 aa19.67■□□□□ 0.74
SDC2-205ENST00000520233 RBM43Q6ZSC3 357 aaKnown RBP19.67■□□□□ 0.74
SDC2-205ENST00000520233 SFR1Q86XK3 245 aa19.67■□□□□ 0.74
SDC2-205ENST00000520233 CCDC155Q8N6L0 562 aa19.67■□□□□ 0.74
SDC2-205ENST00000520233 SPIRE2Q8WWL2 714 aa19.67■□□□□ 0.74
SDC2-205ENST00000520233 OLFML3Q9NRN5 406 aa19.67■□□□□ 0.74
SDC2-205ENST00000520233 KIAA0100Q14667 2235 aaKnown RBP19.66■□□□□ 0.74
SDC2-205ENST00000520233 RHOBTB3O94955 611 aa19.66■□□□□ 0.74
SDC2-205ENST00000520233 MAPTP10636 758 aaKnown RBP19.66■□□□□ 0.74
SDC2-205ENST00000520233 NPTX2P47972 431 aa19.66■□□□□ 0.74
SDC2-205ENST00000520233 GPC3P51654 580 aa19.66■□□□□ 0.74
SDC2-205ENST00000520233 SMTNP53814 917 aa19.66■□□□□ 0.74
SDC2-205ENST00000520233 PEX3P56589 373 aa19.66■□□□□ 0.74
SDC2-205ENST00000520233 PSMD2Q13200 908 aa19.66■□□□□ 0.74
SDC2-205ENST00000520233 CAPSQ13938 189 aa19.66■□□□□ 0.74
SDC2-205ENST00000520233 ZNF410Q86VK4 478 aa19.66■□□□□ 0.74
SDC2-205ENST00000520233 KSR1Q8IVT5 923 aa19.66■□□□□ 0.74
SDC2-205ENST00000520233 CAGE1Q8TC20 777 aa19.66■□□□□ 0.74
SDC2-205ENST00000520233 TRIP12Q14669 1992 aaPredicted RBP19.65■□□□□ 0.74
SDC2-205ENST00000520233 GPR32O75388 356 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 THPOP40225 353 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 NCKAP1LP55160 1127 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 NLRP11P59045 1033 aaKnown RBP19.65■□□□□ 0.74
SDC2-205ENST00000520233 MRPS6P82932 125 aaKnown RBP19.65■□□□□ 0.74
SDC2-205ENST00000520233 BFSP2Q13515 415 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 FAM178BQ8IXR5 827 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 RNF149Q8NC42 400 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 SLC17A8Q8NDX2 589 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 NLRP4Q96MN2 994 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 FIZ1Q96SL8 496 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 ADAMTS10Q9H324 1103 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 KMT5AQ9NQR1 393 aa19.65■□□□□ 0.74
SDC2-205ENST00000520233 LRRIQ4A6NIV6 560 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 CCDC169A6NNP5 214 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 H0YCG3 227 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 M0QZ92 97 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 LETM1O95202 739 aaPredicted RBP19.64■□□□□ 0.73
SDC2-205ENST00000520233 CLTBP09497 229 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 SRGAP2CP0DJJ0 459 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 TMEM62Q0P6H9 643 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 KIZQ2M2Z5 673 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 FAM26DQ5JW98 314 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 FAM26FQ5R3K3 315 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 IFNLR1Q8IU57 520 aaPredicted RBP19.64■□□□□ 0.73
SDC2-205ENST00000520233 TRIML1Q8N9V2 468 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 DEPTORQ8TB45 409 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 NLRP7Q8WX94 980 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 NFKBIZQ9BYH8 718 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 CELF4Q9BZC1 486 aaKnown RBP19.64■□□□□ 0.73
SDC2-205ENST00000520233 GTPBP4Q9BZE4 634 aaKnown RBP19.64■□□□□ 0.73
SDC2-205ENST00000520233 ST6GALNAC4Q9H4F1 302 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 MRPL44Q9H9J2 332 aaKnown RBP19.64■□□□□ 0.73
SDC2-205ENST00000520233 MAN1B1Q9UKM7 699 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 TRPV2Q9Y5S1 764 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 CDY2AQ9Y6F7 541 aa19.64■□□□□ 0.73
SDC2-205ENST00000520233 EVPLQ92817 2033 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 A0A087WZ62 844 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 PITPNM1O00562 1244 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 CKBP12277 381 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 SCP2P22307 547 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 PHKA2P46019 1235 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 PTENP60484 403 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 MGAT3Q09327 533 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 CDCA2Q69YH5 1023 aaPredicted RBP19.63■□□□□ 0.73
SDC2-205ENST00000520233 ZNF720Q7Z2F6 126 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 KCNN1Q92952 543 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 ZNF668Q96K58 619 aaPredicted RBP19.63■□□□□ 0.73
SDC2-205ENST00000520233 SCLT1Q96NL6 688 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 PPP1R16BQ96T49 567 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 FDXACB1Q9BRP7 624 aaPredicted RBP19.63■□□□□ 0.73
SDC2-205ENST00000520233 HTATIP2Q9BUP3 242 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 NOC4LQ9BVI4 516 aaKnown RBP19.63■□□□□ 0.73
SDC2-205ENST00000520233 GCOM2Q9BZD3 368 aaPredicted RBP19.63■□□□□ 0.73
SDC2-205ENST00000520233 C2orf40Q9H1Z8 148 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 CDHR5Q9HBB8 845 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 IFT122Q9HBG6 1241 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 TBC1D7Q9P0N9 293 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 ARHGAP28Q9P2N2 729 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 TBX21Q9UL17 535 aa19.63■□□□□ 0.73
SDC2-205ENST00000520233 ADGRA3Q8IWK6 1321 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 K7ENM7 598 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 SLC16A4O15374 487 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 CHRNA1P02708 482 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 CTSHP09668 335 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 NMT1P30419 496 aaKnown RBP19.62■□□□□ 0.73
SDC2-205ENST00000520233 ABCD1P33897 745 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 EFNA5P52803 228 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 CRYBB1P53674 252 aaPredicted RBP19.62■□□□□ 0.73
SDC2-205ENST00000520233 STK4Q13043 487 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 ALCAMQ13740 583 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 MORC3Q14149 939 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 ZNF618Q5T7W0 954 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 ZNF658Q5TYW1 1059 aaPredicted RBP19.62■□□□□ 0.73
SDC2-205ENST00000520233 HAUS6Q7Z4H7 955 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 SRGAP1Q7Z6B7 1085 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 ZBTB8OSQ8IWT0 167 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 TMEM161BQ8NDZ6 487 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 HPS3Q969F9 1004 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms