RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 TCP11Q8WWU5 503 aa12.38□□□□□ -0.43
PABPC1-214ENST00000520142 NLRP7Q8WX94 980 aa12.38□□□□□ -0.43
PABPC1-214ENST00000520142 PSPC1Q8WXF1 523 aaKnown RBP12.38□□□□□ -0.43
PABPC1-214ENST00000520142 MTRQ99707 1265 aa12.38□□□□□ -0.43
PABPC1-214ENST00000520142 GCOM2Q9BZD3 368 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-214ENST00000520142 ELAC1Q9H777 363 aaKnown RBP12.38□□□□□ -0.43
PABPC1-214ENST00000520142 MINDY3Q9H8M7 445 aa12.38□□□□□ -0.43
PABPC1-214ENST00000520142 C1orf112Q9NSG2 853 aa12.38□□□□□ -0.43
PABPC1-214ENST00000520142 RFXAPO00287 272 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 ASAP2O43150 1006 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 FOSL2P15408 326 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 PTMSP20962 102 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 FGFR4P22455 802 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 CDC25AP30304 524 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 PTPAQ15257 358 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 ZNF598Q86UK7 904 aaKnown RBP12.37□□□□□ -0.43
PABPC1-214ENST00000520142 ASAP3Q8TDY4 903 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 CLP1Q92989 425 aaKnown RBP12.37□□□□□ -0.43
PABPC1-214ENST00000520142 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
PABPC1-214ENST00000520142 YME1L1Q96TA2 773 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 C17orf80Q9BSJ5 609 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 RAB34Q9BZG1 259 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 CERS4Q9HA82 394 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 ATP6V0A4Q9HBG4 840 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 CHST12Q9NRB3 414 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-214ENST00000520142 RNF19AQ9NV58 838 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 STK24Q9Y6E0 443 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 ADGRA3Q8IWK6 1321 aa12.37□□□□□ -0.43
PABPC1-214ENST00000520142 A0A0U1RQF3 1178 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 VPS37CA5D8V6 355 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-214ENST00000520142 C5orf67F2Z3F1 127 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 STAG3L1P0CL83 205 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 ATF7P17544 494 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-214ENST00000520142 CYP11B2P19099 503 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 GLRA2P23416 452 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 HOXA11P31270 313 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-214ENST00000520142 CCT6AP40227 531 aaKnown RBP12.36□□□□□ -0.43
PABPC1-214ENST00000520142 PTENP60484 403 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 GRB10Q13322 594 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 CAPSQ13938 189 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 MXD4Q14582 209 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-214ENST00000520142 KCNK18Q7Z418 384 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 SRGAP1Q7Z6B7 1085 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 CMTR2Q8IYT2 770 aaKnown RBP12.36□□□□□ -0.43
PABPC1-214ENST00000520142 KCTD17Q8N5Z5 321 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 ARNTL2Q8WYA1 636 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 NLRP4Q96MN2 994 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 PNMA5Q96PV4 448 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 NFKBIZQ9BYH8 718 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 INO80BQ9C086 356 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-214ENST00000520142 TMEM161AQ9NX61 479 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 KIAA1024Q9UPX6 916 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 MTCH2Q9Y6C9 303 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 MORC2Q9Y6X9 1032 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-214ENST00000520142 REV3LO60673 3130 aa12.36□□□□□ -0.43
PABPC1-214ENST00000520142 COL4A4P53420 1690 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-214ENST00000520142 DENND3A2RUS2 1198 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 USO1O60763 962 aaKnown RBP12.35□□□□□ -0.43
PABPC1-214ENST00000520142 BRD1O95696 1058 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 SRGAP2CP0DJJ0 459 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 ZSCAN22P10073 491 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-214ENST00000520142 SFPQP23246 707 aaKnown RBP eCLIP12.35□□□□□ -0.43
PABPC1-214ENST00000520142 GATMP50440 423 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 GRIN1Q05586 938 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 SF3A1Q15459 793 aaKnown RBP12.35□□□□□ -0.43
PABPC1-214ENST00000520142 AMHR2Q16671 573 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 CSPP1Q1MSJ5 1256 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 EPC2Q52LR7 807 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 FAM173BQ6P4H8 233 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 PADI6Q6TGC4 694 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 ECHDC2Q86YB7 292 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 RNF149Q8NC42 400 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 MCPH1Q8NEM0 835 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 MAFAQ8NHW3 353 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-214ENST00000520142 SNX29Q8TEQ0 813 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 SAMD11Q96NU1 681 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 GBP4Q96PP9 640 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 GAS2L1Q99501 681 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-214ENST00000520142 GPRC5CQ9NQ84 441 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 AGPAT5Q9NUQ2 364 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 DDX19AQ9NUU7 478 aaKnown RBP12.35□□□□□ -0.43
PABPC1-214ENST00000520142 LMCD1Q9NZU5 365 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 CLIC4Q9Y696 253 aa12.35□□□□□ -0.43
PABPC1-214ENST00000520142 PRUNE2Q8WUY3 3088 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 RALGAPA2Q2PPJ7 1873 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 VWA3AA6NCI4 1184 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 E9PMD0 336 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 GOLGA6L22H0YM25 854 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 H3BNC9 293 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 ZNF623O75123 536 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 EYA4O95677 639 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 EOMESO95936 686 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 BMP15O95972 392 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 ZSCAN20P17040 1043 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-214ENST00000520142 MBTD1Q05BQ5 628 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 PCBP1Q15365 356 aaKnown RBP eCLIP12.34□□□□□ -0.434e-40■■■□□ 17.7
PABPC1-214ENST00000520142 UBXN11Q5T124 520 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 FAM102BQ5T8I3 360 aa12.34□□□□□ -0.43
PABPC1-214ENST00000520142 KRT79Q5XKE5 535 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms