RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 COBLL1Q53SF7 1204 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 GJC2Q5T442 439 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 LRSAM1Q6UWE0 723 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 CXXC5Q7LFL8 322 aaKnown RBP6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 ATG4DQ86TL0 474 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 GRAMD1CQ8IYS0 662 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 PPM1NQ8N819 430 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 GAB3Q8WWW8 586 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 HIST1H2AHQ96KK5 128 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 HIST1H2AJQ99878 128 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 HAPLN2Q9GZV7 340 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 FAM227AF5H4B4 570 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 RHCEP18577 417 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 CDK17Q00537 523 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 RHDQ02161 417 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 CACNB2Q08289 660 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 MAP3K12Q12852 859 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 SKIDA1Q1XH10 827 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 PGS1Q32NB8 556 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 MUM1L1Q5H9M0 696 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 KANK2Q63ZY3 851 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 BTNL9Q6UXG8 535 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 DPP8Q6V1X1 898 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 DENND1CQ8IV53 801 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 ZBTB34Q8NCN2 500 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 WDR48Q8TAF3 677 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 NOL10Q9BSC4 688 aaKnown RBP6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 TMEM60Q9H2L4 133 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 BCAS3Q9H6U6 928 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 SCOCQ9UIL1 159 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 USP18Q9UMW8 372 aa6.75□□□□□ -1.33
HMGB1P46-201ENST00000520062 TPP1O14773 563 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 HTRA2O43464 458 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 TUSC2O75896 110 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 LDHAP00338 332 aaKnown RBP6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 NCAM1P13591 858 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 XPAP23025 273 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 IL12RB1P42701 662 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 HTR3AP46098 478 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 NRG3P56975 720 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 MORC3Q14149 939 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 FYB2Q5VWT5 728 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 IL31Q6EBC2 164 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 KLHDC10Q6PID8 442 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 CD300LDQ6UXZ3 194 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 OVCH2Q7RTZ1 564 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 TMC6Q7Z403 805 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 GLB1L2Q8IW92 636 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 MARCH10Q8NA82 808 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 WRNIP1Q96S55 665 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 GREM2Q9H772 168 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 ARHGAP20Q9P2F6 1191 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 EVLQ9UI08 416 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 SYNPO2Q9UMS6 1093 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 IPPQ9Y573 584 aa6.74□□□□□ -1.33
HMGB1P46-201ENST00000520062 A6NNZ2 444 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 APAF1O14727 1248 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 SEC24DO94855 1032 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 C8BP07358 591 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 GLI1P08151 1106 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 EDNRBP24530 442 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 MCAMP43121 646 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 NEK3P51956 506 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 GJA9P57773 515 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 ZNF280AP59817 542 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 ZNF200P98182 395 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 TARBP2Q15633 366 aaKnown RBP6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 TMC5Q6UXY8 1006 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 FAM26EQ8N5C1 309 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 CAMKK1Q8N5S9 505 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 OR5AN1Q8NGI8 311 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 HDAC10Q969S8 669 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 STRBPQ96SI9 672 aaKnown RBP6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 ZNF552Q9H707 407 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 RBPJLQ9UBG7 517 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 CFAP20Q9Y6A4 193 aaKnown RBP6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 IRS2Q9Y4H2 1338 aa6.73□□□□□ -1.33
HMGB1P46-201ENST00000520062 CCDC154A6NI56 674 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 CYP2C8P10632 490 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 VIPR1P32241 457 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 FAM193AP78312 1265 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 IL13RA1P78552 427 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 MEF2AQ02078 507 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 MGAT2Q10469 447 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 LRP8Q14114 963 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 SAFB2Q14151 953 aaKnown RBP eCLIP6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 DGKDQ16760 1214 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 FAM180AQ6UWF9 173 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 GAREM2Q75VX8 874 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 ABI1Q8IZP0 508 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 PPP1R14CQ8TAE6 165 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 NRG4Q8WWG1 115 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 ADI1Q9BV57 179 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 LIMCH1Q9UPQ0 1083 aa6.72□□□□□ -1.33
HMGB1P46-201ENST00000520062 PMM2O15305 246 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 B3GALT2O43825 422 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 UBXN7O94888 489 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 CHGBP05060 677 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 RPLP2P05387 115 aaKnown RBP6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 FXR1P51114 621 aaKnown RBP eCLIP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms