RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 TECP42680 631 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 KCNQ1P51787 676 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 PTPROQ16827 1216 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 NAALADL2Q58DX5 795 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 TCEAL5Q5H9L2 206 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 ZNF598Q86UK7 904 aaKnown RBP10.44□□□□□ -0.74
HDAC3-215ENST00000519474 ZNF410Q86VK4 478 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 CATSPER3Q86XQ3 398 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 KLHL23Q8NBE8 558 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 PIGOQ8TEQ8 1089 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 TBC1D32Q96NH3 1257 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 C11orf84Q9BUA3 381 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-215ENST00000519474 LMAN2LQ9H0V9 348 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 CWH43Q9H720 699 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 MINDY3Q9H8M7 445 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 XPNPEP1Q9NQW7 623 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 RNF216Q9NWF9 866 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-215ENST00000519474 HCSTQ9UBK5 93 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 CHD9Q3L8U1 2897 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 POTEMA6NI47 508 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 ST18O60284 1047 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 MED24O75448 989 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 ATF7P17544 494 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-215ENST00000519474 HOXA11P31270 313 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-215ENST00000519474 ARL2P36404 184 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 RFC5P40937 340 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 POLGP54098 1239 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-215ENST00000519474 LAMTOR4Q0VGL1 99 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 NBR1Q14596 966 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 AAK1Q2M2I8 961 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 TTC38Q5R3I4 469 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 SRGAP1Q7Z6B7 1085 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 FERMT3Q86UX7 667 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 NOSTRINQ8IVI9 506 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-215ENST00000519474 SLC7A3Q8WY07 619 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 NLRP4Q96MN2 994 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 SCLT1Q96NL6 688 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 TRAIPQ9BWF2 469 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 TMEM117Q9H0C3 514 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-215ENST00000519474 COL4A3BPQ9Y5P4 624 aa10.43□□□□□ -0.74
HDAC3-215ENST00000519474 ZNF623O75123 536 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 IRS1P35568 1242 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 LTBRP36941 435 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 TRAPPC10P48553 1259 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 RARRES1P49788 294 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 POU5F1BQ06416 359 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 ORC2Q13416 577 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-215ENST00000519474 PDIA5Q14554 519 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 COL19A1Q14993 1142 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 IL17AQ16552 155 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 ECM1Q16610 540 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 CLLU1OSQ5K130 101 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 RNF149Q8NC42 400 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 NEK9Q8TD19 979 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 POF1BQ8WVV4 589 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 TCP11Q8WWU5 503 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 PSPC1Q8WXF1 523 aaKnown RBP10.42□□□□□ -0.74
HDAC3-215ENST00000519474 POLR3CQ9BUI4 534 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-215ENST00000519474 NSUN3Q9H649 340 aaKnown RBP10.42□□□□□ -0.74
HDAC3-215ENST00000519474 UBE2ZQ9H832 354 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-215ENST00000519474 UPF2Q9HAU5 1272 aaKnown RBP10.42□□□□□ -0.74
HDAC3-215ENST00000519474 TUFT1Q9NNX1 390 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 DACT1Q9NYF0 836 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 PCDHB6Q9Y5E3 794 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 TCF20Q9UGU0 1960 aaKnown RBP10.42□□□□□ -0.74
HDAC3-215ENST00000519474 MYO7AQ13402 2215 aa10.42□□□□□ -0.74
HDAC3-215ENST00000519474 MEIS3P2A8K0S8 358 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 GAS2O43903 313 aaKnown RBP10.41□□□□□ -0.74
HDAC3-215ENST00000519474 DGAT1O75907 488 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 OR52Z1P0C646 297 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 RPA1P27694 616 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 GJB2P29033 226 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 GTF2F1P35269 517 aaKnown RBP eCLIP10.41□□□□□ -0.74
HDAC3-215ENST00000519474 PHKA2P46019 1235 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 PTENP60484 403 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 ERVFC1P60507 584 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 HYAL1Q12794 435 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 PTGDRQ13258 359 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 ADAM15Q13444 863 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 MXD4Q14582 209 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-215ENST00000519474 EMC2Q15006 297 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 CTC1Q2NKJ3 1217 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 LEXMQ3ZCV2 418 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 UBXN11Q5T124 520 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 SPOUT1Q5T280 376 aaKnown RBP10.41□□□□□ -0.74
HDAC3-215ENST00000519474 CATSPER4Q7RTX7 472 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 MRPL10Q7Z7H8 261 aaKnown RBP10.41□□□□□ -0.74
HDAC3-215ENST00000519474 IFNLR1Q8IU57 520 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-215ENST00000519474 COLGALT1Q8NBJ5 622 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 ADAMTS19Q8TE59 1207 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 PABPC5Q96DU9 382 aaKnown RBP10.41□□□□□ -0.74
HDAC3-215ENST00000519474 NECAB3Q96P71 396 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-215ENST00000519474 NACC1Q96RE7 527 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 MTRQ99707 1265 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 BACH2Q9BYV9 841 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 CHD7Q9P2D1 2997 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 PCDHB12Q9Y5F1 795 aa10.41□□□□□ -0.74
HDAC3-215ENST00000519474 FNDC1Q4ZHG4 1894 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms