RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-209	ENST00000519141	EXOC8	Q8IYI6	725 aa		13.6	□□□□□ -0.23
SPIDR-209	ENST00000519141	CACTIN	Q8WUQ7	758 aa	Known RBP	13.6	□□□□□ -0.23
SPIDR-209	ENST00000519141	BSND	Q8WZ55	320 aa		13.6	□□□□□ -0.23
SPIDR-209	ENST00000519141	CEP89	Q96ST8	783 aa		13.6	□□□□□ -0.23
SPIDR-209	ENST00000519141	TRPC6	Q9Y210	931 aa		13.6	□□□□□ -0.23
SPIDR-209	ENST00000519141	SLC16A3	O15427	465 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	NRDC	O43847	1150 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	HBP1	O60381	514 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	MAF	O75444	373 aa	Predicted RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	ABCD1	P33897	745 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	PSMC4	P43686	418 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	MARS	P56192	900 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	LACTB	P83111	547 aa	Predicted RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	TBX2	Q13207	712 aa	Predicted RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	ARID5B	Q14865	1188 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	PPP2R5A	Q15172	486 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	PKN2	Q16513	984 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	VWA3B	Q502W6	1294 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	MIIP	Q5JXC2	388 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	PPFIBP1	Q86W92	1011 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	TMEM161B	Q8NDZ6	487 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	AGPAT3	Q9NRZ7	376 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	CGN	Q9P2M7	1197 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	ZNF215	Q9UL58	517 aa	Predicted RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	EXOC7	Q9UPT5	735 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141		A0A1W2PQC6	194 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	DENND3	A2RUS2	1198 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	CLIC2	O15247	247 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	GAS2	O43903	313 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	PPFIA4	O75335	1185 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	TPM1	P09493	284 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	EPB41	P11171	864 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	SI	P14410	1827 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	CTGF	P29279	349 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	CYP2C19	P33261	490 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	LRMP	Q12912	555 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	TRIM14	Q14142	442 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	CEP135	Q66GS9	1140 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	ARMCX5	Q6P1M9	558 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	TRIM59	Q8IWR1	403 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	TMEM143	Q96AN5	459 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	JPH2	Q9BR39	696 aa	Predicted RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	NTPCR	Q9BSD7	190 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	KIFC3	Q9BVG8	833 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	NDST4	Q9H3R1	872 aa		13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SPIDR-209	ENST00000519141	KIAA0100	Q14667	2235 aa	Known RBP	13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	TNRC18	O15417	2968 aa	Predicted RBP	13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	MMP3	P08254	477 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	ZNF286B	P0CG31	522 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	SCP2	P22307	547 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	ARL2	P36404	184 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	PRAMEF19	Q5SWL8	479 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	FRMD5	Q7Z6J6	570 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	MAP4K3	Q8IVH8	894 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	TCP11	Q8WWU5	503 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	ARHGAP39	Q9C0H5	1083 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	IKZF4	Q9H2S9	585 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	METTL14	Q9HCE5	456 aa	Known RBP	13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	FAM184B	Q9ULE4	1060 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	TBX20	Q9UMR3	447 aa		13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
SPIDR-209	ENST00000519141	ADGRA3	Q8IWK6	1321 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	ADCY6	O43306	1168 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	XRCC5	P13010	732 aa	Known RBP	13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	HOXD8	P13378	290 aa	Predicted RBP	13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	NAMPT	P43490	491 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	CYP2J2	P51589	502 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	SNRPF	P62306	86 aa	Known RBP	13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	CAP1	Q01518	475 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	SP3	Q02447	781 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	PPP2R3A	Q06190	1150 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	MYBPC2	Q14324	1141 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	KIF22	Q14807	665 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	DGKD	Q16760	1214 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	SLC9A9	Q8IVB4	645 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	ASAP3	Q8TDY4	903 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	MKNK1	Q9BUB5	465 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	COL1A2	P08123	1366 aa		13.57	□□□□□ -0.24
SPIDR-209	ENST00000519141	LRRIQ4	A6NIV6	560 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	ZBTB42	B2RXF5	422 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	AKAP3	O75969	853 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	GLRA2	P23416	452 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	PSMC2	P35998	433 aa	Known RBP	13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	SYCP1	Q15431	976 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	ZNF484	Q5JVG2	852 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	IER5	Q5VY09	327 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	TLK2	Q86UE8	772 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	C12orf56	Q8IXR9	622 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	FAM186B	Q8IYM0	893 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	CCDC112	Q8NEF3	446 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	DEPTOR	Q8TB45	409 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	ERGIC2	Q96RQ1	377 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	DMAC2	Q9NW81	257 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	ARHGAP28	Q9P2N2	729 aa		13.56	□□□□□ -0.24
SPIDR-209	ENST00000519141	GNE	Q9Y223	722 aa	Known RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms