RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 HDGFL2Q7Z4V5 671 aaPredicted RBP7.33□□□□□ -1.24
SQLE-203ENST00000518931 FRMD5Q7Z6J6 570 aa7.33□□□□□ -1.24
SQLE-203ENST00000518931 FERMT3Q86UX7 667 aa7.33□□□□□ -1.24
SQLE-203ENST00000518931 LGI4Q8N135 537 aa7.33□□□□□ -1.24
SQLE-203ENST00000518931 WDR66Q8TBY9 1149 aa7.33□□□□□ -1.24
SQLE-203ENST00000518931 CARD11Q9BXL7 1154 aa7.33□□□□□ -1.24
SQLE-203ENST00000518931 ADAM7Q9H2U9 754 aa7.33□□□□□ -1.24
SQLE-203ENST00000518931 APOBEC2Q9Y235 224 aaKnown RBP7.33□□□□□ -1.24
SQLE-203ENST00000518931 INVSQ9Y283 1065 aa7.33□□□□□ -1.24
SQLE-203ENST00000518931 SCINQ9Y6U3 715 aa7.33□□□□□ -1.24
SQLE-203ENST00000518931 B4GALT3O60512 393 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 HMGCRP04035 888 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 CSF2RBP32927 897 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 TMPRSS15P98073 1019 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 AMPD3Q01432 767 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 MAP3K12Q12852 859 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 VPS72Q15906 364 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 TMEM200BQ69YZ2 307 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 FRMD7Q6ZUT3 714 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 TTLL10Q6ZVT0 673 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 RASSF3Q86WH2 238 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 REXO1L1PQ8IX06 675 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 IFNL2Q8IZJ0 200 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 USP36Q9P275 1121 aaKnown RBP7.32□□□□□ -1.24
SQLE-203ENST00000518931 ANAPC4Q9UJX5 808 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 PTPN22Q9Y2R2 807 aa7.32□□□□□ -1.24
SQLE-203ENST00000518931 ELL2O00472 640 aaPredicted RBP7.31□□□□□ -1.24
SQLE-203ENST00000518931 EPB41L2O43491 1005 aaKnown RBP7.31□□□□□ -1.24
SQLE-203ENST00000518931 CAND2O75155 1236 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 ULK1O75385 1050 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 ZNF888P0CJ79 500 aaPredicted RBP7.31□□□□□ -1.24
SQLE-203ENST00000518931 CNR2P34972 360 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 ETV4P43268 484 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 RRADP55042 308 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 BCAR1P56945 870 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 ANTXR2P58335 489 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 POU5F1Q01860 360 aaKnown RBP7.31□□□□□ -1.24
SQLE-203ENST00000518931 USP10Q14694 798 aaKnown RBP7.31□□□□□ -1.24
SQLE-203ENST00000518931 ESPNLQ6ZVH7 1005 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 LARP4Q71RC2 724 aaKnown RBP eCLIP7.31□□□□□ -1.24
SQLE-203ENST00000518931 KANSL1Q7Z3B3 1105 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 DDX42Q86XP3 938 aaKnown RBP eCLIP7.31□□□□□ -1.24
SQLE-203ENST00000518931 SAMD3Q8N6K7 520 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 CLRN3Q8NCR9 226 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.31□□□□□ -1.24
SQLE-203ENST00000518931 PPM1EQ8WY54 764 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 RPGRQ92834 1020 aaKnown RBP7.31□□□□□ -1.24
SQLE-203ENST00000518931 PAGR1Q9BTK6 254 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 KCNG1Q9UIX4 513 aa7.31□□□□□ -1.24
SQLE-203ENST00000518931 CFAP69A5D8W1 941 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 LDHAP00338 332 aaKnown RBP7.3□□□□□ -1.24
SQLE-203ENST00000518931 STAT5BP51692 787 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 SESN3P58005 492 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 MAP9Q49MG5 647 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 UBXN11Q5T124 520 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 TRIM68Q6AZZ1 485 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 IQSEC1Q6DN90 963 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 KIAA1841Q6NSI8 718 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 RALYLQ86SE5 291 aaKnown RBP7.3□□□□□ -1.24
SQLE-203ENST00000518931 BCL6BQ8N143 479 aaPredicted RBP7.3□□□□□ -1.24
SQLE-203ENST00000518931 C20orf173Q96LM9 149 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 ANO3Q9BYT9 981 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 KCMF1Q9P0J7 381 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 SAE1Q9UBE0 346 aaPredicted RBP7.3□□□□□ -1.24
SQLE-203ENST00000518931 ATP8A1Q9Y2Q0 1164 aa7.3□□□□□ -1.24
SQLE-203ENST00000518931 IFRD1O00458 451 aaPredicted RBP7.29□□□□□ -1.24
SQLE-203ENST00000518931 GPR39O43194 453 aa7.29□□□□□ -1.24
SQLE-203ENST00000518931 PRICKLE3O43900 615 aaPredicted RBP7.29□□□□□ -1.24
SQLE-203ENST00000518931 KDM1AO60341 852 aa7.29□□□□□ -1.24
SQLE-203ENST00000518931 MAFO75444 373 aaPredicted RBP7.29□□□□□ -1.24
SQLE-203ENST00000518931 BRD3Q15059 726 aa7.29□□□□□ -1.24
SQLE-203ENST00000518931 DGKDQ16760 1214 aa7.29□□□□□ -1.24
SQLE-203ENST00000518931 RNF219Q5W0B1 726 aaPredicted RBP7.29□□□□□ -1.24
SQLE-203ENST00000518931 RTKN2Q8IZC4 609 aa7.29□□□□□ -1.24
SQLE-203ENST00000518931 PAF1Q8N7H5 531 aa7.29□□□□□ -1.24
SQLE-203ENST00000518931 PDILTQ8N807 584 aa7.29□□□□□ -1.24
SQLE-203ENST00000518931 INO80BQ9C086 356 aaPredicted RBP7.29□□□□□ -1.24
SQLE-203ENST00000518931 VTA1Q9NP79 307 aa7.29□□□□□ -1.24
SQLE-203ENST00000518931 MAP3K20Q9NYL2 800 aaKnown RBP7.29□□□□□ -1.24
SQLE-203ENST00000518931 MCM8Q9UJA3 840 aa7.29□□□□□ -1.24
SQLE-203ENST00000518931 MYPNQ86TC9 1320 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 A0A0G2JLL6 359 aaPredicted RBP7.28□□□□□ -1.24
SQLE-203ENST00000518931 PRSS38A1L453 326 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 GNALP38405 381 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 MEOX1P50221 254 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 PPP2CBP62714 309 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 PPP2CAP67775 309 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 PCOLCEQ15113 449 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 ZBTB41Q5SVQ8 909 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 L1TD1Q5T7N2 865 aaKnown RBP7.28□□□□□ -1.24
SQLE-203ENST00000518931 CCDC174Q6PII3 467 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 CXorf67Q86X51 503 aaPredicted RBP7.28□□□□□ -1.24
SQLE-203ENST00000518931 OR5AN1Q8NGI8 311 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 SECISBP2LQ93073 1101 aaKnown RBP7.28□□□□□ -1.24
SQLE-203ENST00000518931 FERMT2Q96AC1 680 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 TEPSINQ96N21 525 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 MPHOSPH6Q99547 160 aaKnown RBP7.28□□□□□ -1.24
SQLE-203ENST00000518931 KIAA1683Q9H0B3 1180 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 MTG2Q9H4K7 406 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 TOPORSQ9NS56 1045 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms