RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CDIP1Q9H305 208 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 EPB41L1Q9H4G0 881 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 PRDM11Q9NQV5 511 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 TOMM22Q9NS69 142 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 SEMA3GQ9NS98 782 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 MKS1Q9NXB0 559 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 GULP1Q9UBP9 304 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 DBF4Q9UBU7 674 aaPredicted RBP5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 PLAGL2Q9UPG8 496 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 EXOC6BQ9Y2D4 811 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 ANKRD6Q9Y2G4 727 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 COA3Q9Y2R0 106 aaPredicted RBP5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 GIT1Q9Y2X7 761 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 SPO11Q9Y5K1 396 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 MRFAP1Q9Y605 127 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 TUBGCP6Q96RT7 1819 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 LAMB4A4D0S4 1761 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 PITPNM2Q9BZ72 1349 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 DISP2A7MBM2 1401 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 COL16A1Q07092 1604 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 WTIPA6NIX2 430 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 XPOTO43592 962 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 RBP3P10745 1247 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 SLC9A1P19634 815 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 LORP23490 312 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 LSP1P33241 339 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 SCAND1P57086 179 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 PHC1P78364 1004 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 NFIAQ12857 509 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 OS9Q13438 667 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 BECN1Q14457 450 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 CPSF6Q16630 551 aaKnown RBP eCLIP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 IFI16Q16666 785 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 TSHZ3Q63HK5 1081 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 HHIPL2Q6UWX4 724 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 ARHGAP36Q6ZRI8 547 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 PRR23CQ6ZRP0 262 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 DGKHQ86XP1 1220 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 Q8N1Y9 231 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 CPA6Q8N4T0 437 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 SSH3Q8TE77 659 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 DPF3Q92784 378 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 ZNF496Q96IT1 587 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 FAXDC2Q96IV6 333 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 DCAF5Q96JK2 942 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 TCF7L1Q9HCS4 588 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 ATP13A1Q9HD20 1204 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 DDX21Q9NR30 783 aaKnown RBP eCLIP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 ADGRE2Q9UHX3 823 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 PNMA8BQ9ULN7 279 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 ZNF652Q9Y2D9 606 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 MAP3K2Q9Y2U5 619 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 NOC2LQ9Y3T9 749 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 UBR2Q8IWV8 1755 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 LTBP4Q8N2S1 1624 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 COL22A1Q8NFW1 1626 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 PCDH11XQ9BZA7 1347 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 PCDH11YQ9BZA8 1340 aa5.74□□□□□ -1.49
CTNNA1-212ENST00000518919 TMEM265A0A087WTH1 108 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 EIF3JO75822 258 aaKnown RBP5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 ESR1P03372 595 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 AMY2AP04746 511 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 NBPF7P0C2Y1 421 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 ZBTB48P10074 688 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 COL6A2P12110 1019 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 AMY2BP19961 511 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 KIF11P52732 1056 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 PDE1AP54750 535 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 KRT85P78386 507 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 MTX1Q13505 466 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 LRRC32Q14392 662 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 CLUL1Q15846 466 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 FIGNQ5HY92 759 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 SYCP2LQ5T4T6 812 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 FSTL4Q6MZW2 842 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 OTOP3Q7RTS5 596 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 PPP1R42Q7Z4L9 355 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 CD163Q86VB7 1156 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 RASSF3Q86WH2 238 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 NOSTRINQ8IVI9 506 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 PLD6Q8N2A8 252 aaKnown RBP5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 SHKBP1Q8TBC3 707 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 NETO1Q8TDF5 533 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 SYTL4Q96C24 671 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 MPHOSPH6Q99547 160 aaKnown RBP5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 ELF4Q99607 663 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 SPOCK3Q9BQ16 436 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 LRRCC1Q9C099 1032 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 TOPORSQ9NS56 1045 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 HYPKQ9NX55 129 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 OBP2AQ9NY56 170 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 INVSQ9Y283 1065 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 COMMD10Q9Y6G5 202 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 UTYO14607 1347 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 AOX1Q06278 1338 aa5.73□□□□□ -1.49
CTNNA1-212ENST00000518919 PLCH1Q4KWH8 1693 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 ROBO1Q9Y6N7 1651 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 GOLGA8AA7E2F4 631 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 GOLGA8BA8MQT2 603 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 C22orf46C9J442 243 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms