RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ARMCX3Q9UH62 379 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC9-205ENST00000518839 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
TRAPPC9-205ENST00000518839 ZNF215Q9UL58 517 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC9-205ENST00000518839 FRMD4BQ9Y2L6 1034 aa16.53■□□□□ 0.24
TRAPPC9-205ENST00000518839 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRAPPC9-205ENST00000518839 ZNF500O60304 480 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 LGALS2P05162 132 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 XRCC5P13010 732 aaKnown RBP16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 HOXD8P13378 290 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 SMPD1P17405 629 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 CYP2B6P20813 491 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 APLP1P51693 650 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 KCNA1Q09470 495 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 IER5Q5VY09 327 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 AFG1LQ8WV93 481 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 DMAC2Q9NW81 257 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 TBX20Q9UMR3 447 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 TRPC6Q9Y210 931 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 Q9Y3F1 56 aa16.52■□□□□ 0.24
TRAPPC9-205ENST00000518839 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 DENND3A2RUS2 1198 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 CLIC2O15247 247 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 MAPK13O15264 365 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 SKILP12757 684 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 MARK3P27448 753 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 KCNJ6P48051 423 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 LRMPQ12912 555 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 KIF22Q14807 665 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 DGKDQ16760 1214 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 FIGNQ5HY92 759 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 CEP135Q66GS9 1140 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 PANX2Q96RD6 677 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 ZIC5Q96T25 663 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 CFHR5Q9BXR6 569 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 ARHGAP28Q9P2N2 729 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 KAT6AQ92794 2004 aa16.51■□□□□ 0.23
TRAPPC9-205ENST00000518839 IGKV6-21A0A0C4DH24 114 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 MAGEB2O15479 319 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 MFAP3LO75121 409 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 IGHA2P01877 340 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 MMP3P08254 477 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 ZNF865P0CJ78 1059 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 LACTBP83111 547 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 CCZ1BP86790 482 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 CCZ1P86791 482 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 MXD4Q14582 209 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 ARID5BQ14865 1188 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 SYCP1Q15431 976 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 BRDTQ58F21 947 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 TMEM63BQ5T3F8 832 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 TRIM50Q86XT4 487 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 KSR1Q8IVT5 923 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 FAM186BQ8IYM0 893 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 TC2NQ8N9U0 490 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 DEPTORQ8TB45 409 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 KIAA1524Q8TCG1 905 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 BSNDQ8WZ55 320 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 PCMTD1Q96MG8 357 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 NAA15Q9BXJ9 866 aaKnown RBP16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 TMEM134Q9H6X4 195 aa16.5■□□□□ 0.23
TRAPPC9-205ENST00000518839 KIAA0391O15091 583 aaKnown RBP16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 ASAP2O43150 1006 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 EXOC3O60645 756 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 AKAP3O75969 853 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 GYPCP04921 128 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 GLRA2P23416 452 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 PSMC4P43686 418 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 RBL2Q08999 1139 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 STRN3Q13033 797 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 GJC2Q5T442 439 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 XXYLT1Q8NBI6 393 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 PSPC1Q8WXF1 523 aaKnown RBP16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 TMEM143Q96AN5 459 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 EDEM3Q9BZQ6 932 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 TMX1Q9H3N1 280 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 FLRT1Q9NZU1 646 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 ZSWIM8A7E2V4 1837 aa16.49■□□□□ 0.23
TRAPPC9-205ENST00000518839 A0A1W2PQJ5 194 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 STX10O60499 249 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 AOC2O75106 756 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 AFPP02771 609 aaKnown RBP16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 KRT13P13646 458 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 TRIM21P19474 475 aaKnown RBP16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 GARTP22102 1010 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 CASP14P31944 242 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 MAP2K2P36507 400 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 CYP2J2P51589 502 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 EFNA5P52803 228 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 SOX10P56693 466 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 KCNH2Q12809 1159 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 TFDP1Q14186 410 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 PTPN21Q16825 1174 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 TSR1Q2NL82 804 aaKnown RBP16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 MFSD14CQ5VZR4 134 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 ZNF397Q8NF99 534 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 ASAP3Q8TDY4 903 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 BAG1Q99933 345 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 C16orf70Q9BSU1 422 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 AP5M1Q9H0R1 490 aa16.48■□□□□ 0.23
TRAPPC9-205ENST00000518839 C2orf40Q9H1Z8 148 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms