RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CLEC2LP0C7M8 214 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 HOXA5P20719 270 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 MEOX1P50221 254 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS13B-207ENST00000518569 CT83Q5H943 113 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 NT5DC1Q5TFE4 455 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 CCDC62Q6P9F0 684 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 KLHDC10Q6PID8 442 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 PLEKHH3Q7Z736 793 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 RALYLQ86SE5 291 aaKnown RBP5.01□□□□□ -1.61
VPS13B-207ENST00000518569 CMIPQ8IY22 773 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 RTKN2Q8IZC4 609 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 NKD2Q969F2 451 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-207ENST00000518569 EAF2Q96CJ1 260 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-207ENST00000518569 MTMR8Q96EF0 704 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 DYDC2Q96IM9 177 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 CEP89Q96ST8 783 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 ZDHHC9Q9Y397 364 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 A0A0A6YYK5 440 aaPredicted RBP5□□□□□ -1.61
VPS13B-207ENST00000518569 SHTN1A0MZ66 631 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 SEC24DO94855 1032 aaPredicted RBP5□□□□□ -1.61
VPS13B-207ENST00000518569 FSBPO95073 299 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 SPIDRQ14159 915 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 TRIM25Q14258 630 aaKnown RBP5□□□□□ -1.61
VPS13B-207ENST00000518569 SURF1Q15526 300 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 ANO4Q32M45 955 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 LARP4Q71RC2 724 aaKnown RBP eCLIP5□□□□□ -1.61
VPS13B-207ENST00000518569 KCNK18Q7Z418 384 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 KBTBD2Q8IY47 623 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 LGI4Q8N135 537 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 C1orf162Q8NEQ5 155 aaPredicted RBP5□□□□□ -1.61
VPS13B-207ENST00000518569 GAB3Q8WWW8 586 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 PAWRQ96IZ0 340 aaKnown RBP5□□□□□ -1.61
VPS13B-207ENST00000518569 WDR92Q96MX6 357 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 SOX7Q9BT81 388 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 SLC13A1Q9BZW2 595 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 CCDC8Q9H0W5 538 aaPredicted RBP5□□□□□ -1.61
VPS13B-207ENST00000518569 KCTD10Q9H3F6 313 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 MSL2Q9HCI7 577 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 PARD6AQ9NPB6 346 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 USP18Q9UMW8 372 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 CDY2AQ9Y6F7 541 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 SLC4A7Q9Y6M7 1214 aa5□□□□□ -1.61
VPS13B-207ENST00000518569 B4GALT3O60512 393 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 LPLP06858 475 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 ZNF888P0CJ79 500 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-207ENST00000518569 RBP3P10745 1247 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 XPAP23025 273 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-207ENST00000518569 MTNR1BP49286 362 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 MRE11P49959 708 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 STAT5BP51692 787 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 NRG3P56975 720 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 NFYCQ13952 458 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 PCOLCEQ15113 449 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 AGBL4Q5VU57 503 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 USP30Q70CQ3 517 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 AMOTL1Q8IY63 956 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 AUTS2Q8WXX7 1259 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 RELTQ969Z4 430 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 FUBP3Q96I24 572 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS13B-207ENST00000518569 FAXDC2Q96IV6 333 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 OR10A2Q9H208 303 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 JADE2Q9NQC1 790 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 CCM2LQ9NUG4 571 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-207ENST00000518569 USP40Q9NVE5 1235 aa4.99□□□□□ -1.61
VPS13B-207ENST00000518569 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS13B-207ENST00000518569 CTDP1Q9Y5B0 961 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-207ENST00000518569 TTBK1Q5TCY1 1321 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-207ENST00000518569 PMS2P1A4D2B8 440 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 PPM1GO15355 546 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-207ENST00000518569 DAPK3O43293 454 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 CELA3BP08861 270 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 IARSP41252 1262 aaKnown RBP4.98□□□□□ -1.61
VPS13B-207ENST00000518569 SLC5A3P53794 718 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 LGALS4P56470 323 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 PPARAQ07869 468 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 MUM1Q2TAK8 710 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 ZNF568Q3ZCX4 644 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 ZFYVE27Q5T4F4 411 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 PGM2L1Q6PCE3 622 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 FRMD5Q7Z6J6 570 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 GLB1L2Q8IW92 636 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 UNC5BQ8IZJ1 945 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 TGFBRAP1Q8WUH2 860 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 QRSL1Q9H0R6 528 aaKnown RBP4.98□□□□□ -1.61
VPS13B-207ENST00000518569 XYLT2Q9H1B5 865 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 PRDM12Q9H4Q4 367 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 ZNF277Q9NRM2 450 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-207ENST00000518569 DNAJC28Q9NX36 388 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 EVLQ9UI08 416 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-207ENST00000518569 MAGEL2Q9UJ55 1249 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 GPR45Q9Y5Y3 372 aa4.98□□□□□ -1.61
VPS13B-207ENST00000518569 TNKSO95271 1327 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 FZD9O00144 591 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 ARHGAP6O43182 974 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 B4GALT4O60513 344 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 MYBL2P10244 700 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 NEK2P51955 445 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 PPP2CBP62714 309 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms