RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 HOXA5P20719 270 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 TNFRSF8P28908 595 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 RBM5P52756 815 aaKnown RBP eCLIP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 ATP11AP98196 1134 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 SCAPQ12770 1279 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 HYAL1Q12794 435 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 SEPT6Q14141 434 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 LPAL2Q16609 132 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 FBXW10Q5XX13 1052 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 ZNF574Q6ZN55 896 aaPredicted RBP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 SV2BQ7L1I2 683 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 PRRT2Q7Z6L0 340 aaPredicted RBP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 FILIP1Q7Z7B0 1213 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 RNF180Q86T96 592 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 FAM35AQ86V20 835 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 MAML2Q8IZL2 1156 aaPredicted RBP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 MMP21Q8N119 569 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 AGGF1Q8N302 714 aaeCLIP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 MICAL1Q8TDZ2 1067 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 CELF1Q92879 486 aaKnown RBP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 NKD1Q969G9 470 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 EDC3Q96F86 508 aaKnown RBP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 SHDQ96IW2 340 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 C17orf80Q9BSJ5 609 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 SLC12A5Q9H2X9 1139 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 DNAJB12Q9NXW2 375 aaKnown RBP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 SIRPGQ9P1W8 387 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 R3HCC1Q9Y3T6 440 aaKnown RBP4.2□□□□□ -1.74
CPNE3-204ENST00000517862 ATG2AQ2TAZ0 1938 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 ATMQ13315 3056 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 SALL3Q9BXA9 1300 aa4.2□□□□□ -1.74
CPNE3-204ENST00000517862 RP1L1Q8IWN7 2480 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-204ENST00000517862 CCDC168Q8NDH2 2452 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 PKD1L1Q8TDX9 2849 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 ICE1Q9Y2F5 2266 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 COL5A1P20908 1838 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-204ENST00000517862 ENPP3O14638 875 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 IRS4O14654 1257 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-204ENST00000517862 MARCH6O60337 910 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 DIAPH2O60879 1101 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 KIF4AO95239 1232 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 PSAPP07602 524 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 RETP07949 1114 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 HCLS1P14317 486 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-204ENST00000517862 CPB1P15086 417 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 FOSL1P15407 271 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 CR2P20023 1033 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 MAPK4P31152 587 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 MCM4P33991 863 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 PCSK7Q16549 785 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 ZNF528Q3MIS6 628 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 STPG1Q5TH74 334 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 TTLL5Q6EMB2 1281 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 LAIR1Q6GTX8 287 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 DEFB128Q7Z7B8 93 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 ZC3H18Q86VM9 953 aaKnown RBP4.19□□□□□ -1.74
CPNE3-204ENST00000517862 KCNB2Q92953 911 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 SCLYQ96I15 445 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 UTP14AQ9BVJ6 771 aaKnown RBP4.19□□□□□ -1.74
CPNE3-204ENST00000517862 RASSF4Q9H2L5 321 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 CCDC86Q9H6F5 360 aaKnown RBP4.19□□□□□ -1.74
CPNE3-204ENST00000517862 ERVK-5Q9HDB9 667 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 XPNPEP3Q9NQH7 507 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 SEC31BQ9NQW1 1179 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 DZANK1Q9NVP4 752 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 FANCLQ9NW38 375 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 KLHL42Q9P2K6 505 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 ZNF70Q9UC06 446 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-204ENST00000517862 STRIP2Q9ULQ0 834 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 AGTPBP1Q9UPW5 1226 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 MGAQ8IWI9 3026 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 SCN5AQ14524 2016 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 JMJD1CQ15652 2540 aa4.19□□□□□ -1.74
CPNE3-204ENST00000517862 LAMA1P25391 3075 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 CRYBG3Q68DQ2 2970 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 A0A096LPE4 126 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 A0A1W2PPZ6 126 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 ESYT3A0FGR9 886 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 LRRC10BA6NIK2 292 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 F8W031 263 aaPredicted RBP4.18□□□□□ -1.74
CPNE3-204ENST00000517862 J3QW42 95 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 PGK1P00558 417 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 PFKMP08237 780 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 ATF7P17544 494 aaPredicted RBP4.18□□□□□ -1.74
CPNE3-204ENST00000517862 CDK7P50613 346 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 IGBP1P78318 339 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 HYAL2Q12891 473 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 COASYQ13057 564 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 GPM6BQ13491 265 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 DCAF15Q66K64 600 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 ELMSAN1Q6PJG2 1045 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 AGMOQ6ZNB7 445 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 GPR142Q7Z601 462 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 TMCO2Q7Z6W1 182 aaPredicted RBP4.18□□□□□ -1.74
CPNE3-204ENST00000517862 PLEKHH3Q7Z736 793 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 ATG4DQ86TL0 474 aaPredicted RBP4.18□□□□□ -1.74
CPNE3-204ENST00000517862 CLEC10AQ8IUN9 316 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 FAM126BQ8IXS8 530 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 LILRB2Q8N423 598 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 MKL1Q969V6 931 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms