RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 FGFR1OP2Q9NVK5 253 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 MTMR4Q9NYA4 1195 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 CHORDC1Q9UHD1 332 aaPredicted RBP13.38□□□□□ -0.27
PCM1-203ENST00000517545 NAV1Q8NEY1 1877 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 ANKRD63C9JTQ0 380 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 IGF2BP3O00425 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
PCM1-203ENST00000517545 HGSO14964 777 aaPredicted RBP13.37□□□□□ -0.27
PCM1-203ENST00000517545 AGTP01019 485 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 FERP16591 822 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 PTGIRP43119 386 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 EPM2AIP1Q7L775 607 aaPredicted RBP13.37□□□□□ -0.27
PCM1-203ENST00000517545 ZNF570Q96NI8 536 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 ECT2Q9H8V3 914 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 PSTPIP2Q9H939 334 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 CFAP73A6NFT4 308 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 FAM187AA6NFU0 413 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 DIAPH2O60879 1101 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 TMEM253P0C7T8 217 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 VCAM1P19320 739 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 ANXA13P27216 316 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 POLD1P28340 1107 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 AUHQ13825 339 aaKnown RBP13.37□□□□□ -0.27
PCM1-203ENST00000517545 DRAP1Q14919 205 aaPredicted RBP13.37□□□□□ -0.27
PCM1-203ENST00000517545 NAIF1Q69YI7 327 aaPredicted RBP13.37□□□□□ -0.27
PCM1-203ENST00000517545 COL23A1Q86Y22 540 aaPredicted RBP13.37□□□□□ -0.27
PCM1-203ENST00000517545 MAB21L3Q8N8X9 362 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 PNMA3Q9UL41 463 aa13.37□□□□□ -0.27
PCM1-203ENST00000517545 SFI1A8K8P3 1242 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 USP17L10C9JJH3 530 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 AKR1B1P15121 316 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 SOX5P35711 763 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 NOVP48745 357 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 SLC8A3P57103 927 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 ASPRV1Q53RT3 343 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 C6orf118Q5T5N4 469 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 PRELID2Q8N945 189 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 CCDC134Q9H6E4 229 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 SRP68Q9UHB9 627 aaKnown RBP13.36□□□□□ -0.27
PCM1-203ENST00000517545 TRIM33Q9UPN9 1127 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 PITPNM2Q9BZ72 1349 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 TMEM110-MUSTN1A8MSY1 372 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 PDXKO00764 312 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 CALUO43852 315 aaPredicted RBP13.36□□□□□ -0.27
PCM1-203ENST00000517545 KRT16P08779 473 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 CCNHP51946 323 aaPredicted RBP13.36□□□□□ -0.27
PCM1-203ENST00000517545 ADCY2Q08462 1091 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 BZW1Q7L1Q6 419 aaKnown RBP13.36□□□□□ -0.27
PCM1-203ENST00000517545 EXOC3L1Q86VI1 746 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 CCDC25Q86WR0 208 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 STK38LQ9Y2H1 464 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 TCP11X1B4DZS4 312 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 RIPK2O43353 540 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 KCNQ2O43526 872 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 GCNT3O95395 438 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 TM4SF1P30408 202 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 DHX34Q14147 1143 aaKnown RBP13.36□□□□□ -0.27
PCM1-203ENST00000517545 NFIXQ14938 502 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 KCTD1Q719H9 257 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 NBPF5PQ86XG9 351 aaPredicted RBP13.36□□□□□ -0.27
PCM1-203ENST00000517545 LINC00116Q8NCU8 138 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 GPR88Q9GZN0 384 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 DNAJC12Q9UKB3 198 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 PTPN22Q9Y2R2 807 aa13.36□□□□□ -0.27
PCM1-203ENST00000517545 ATP8B3O60423 1300 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 TCRBV7S2A1N4TA0A589 114 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 OAS1P00973 400 aaKnown RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 LMNB1P20700 586 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 CYP4A11Q02928 519 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 LONRF1Q17RB8 773 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 DPP8Q6V1X1 898 aaPredicted RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 FMNL3Q8IVF7 1028 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 NAP1L3Q99457 506 aaPredicted RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 SYT11Q9BT88 431 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 ALG6Q9Y672 507 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 LDHCP07864 332 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 ZNF543Q08ER8 600 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 LLGL1Q15334 1064 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 KSR1Q8IVT5 923 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 DYDC1Q8WWB3 177 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 DDX23Q9BUQ8 820 aaKnown RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 TYW1Q9NV66 732 aaKnown RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 RASAL2Q9UJF2 1139 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 BCS1LQ9Y276 419 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 THRAP3Q9Y2W1 955 aaKnown RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 USP15Q9Y4E8 981 aaPredicted RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 PCDHA3Q9Y5H8 950 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 PHF2O75151 1096 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 SPATA31C1P0DKV0 1188 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 SNHG28P0DPA3 235 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 ALADP13716 330 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 PDE6CP51160 858 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 DRG2P55039 364 aaKnown RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 RHBDL3P58872 404 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 GALNTL6Q49A17 601 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 TNFAIP8L3Q5GJ75 292 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms